G131098


Basic Information

Item Value
gene id G131098
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 8454013 ~ 8454240 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU149090
CTCCAAACACAATACTAAAGGAACACTTTGTATAATCTATAATCATGTTCTGAACTGACTATTCAGTTAAGGGTAATATGTAGTTTGCACCTTTAATGAGTCCTACGTGCTGTTGCTAACACTGTGATTTGTGACCCAAAGTGCACACTTTACCTTATCTCAGTGTTTGGTTCCAAGAAAAATCTCTATAGCTACAAGTAATCCTATTGCTGCTTATGGTACCTCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU149090 True 228 lncRNA 0.37 1 8454013 8454240

Neighbor

gene id symbol gene type direction distance location
CI01000026_08447474_08449558 TPPP3 coding upstream 3402 8447396 ~ 8450611 (+)
CI01000026_08421799_08434134 ZDHHC1 coding upstream 19820 8421683 ~ 8434193 (+)
CI01000026_08313929_08318869 ATP6V0D1, ATP6V0D1.L coding upstream 135122 8311795 ~ 8318891 (+)
CI01000026_08297901_08307596 CTRB1 coding upstream 146384 8297857 ~ 8307629 (+)
CI01000026_08248451_08250136 DDX28 coding upstream 203792 8248371 ~ 8250221 (+)
CI01000026_08454661_08461606 NA coding downstream 421 8454661 ~ 8461921 (+)
CI01000026_08474877_08483134 NA coding downstream 20637 8474877 ~ 8483268 (+)
CI01000026_08944583_08947981 NA coding downstream 490286 8944526 ~ 8947993 (+)
CI01000026_08950735_08960908 NA coding downstream 496423 8950663 ~ 8961146 (+)
CI01000026_09076625_09079154 IRX3A, IRX3 coding downstream 620976 9075216 ~ 9079338 (+)
G131088 NA non-coding upstream 43129 8410642 ~ 8410884 (+)
G131015 NA non-coding upstream 121298 8332107 ~ 8332715 (+)
G131048 NA non-coding upstream 142264 8311533 ~ 8311749 (+)
G131046 NA non-coding upstream 144239 8309566 ~ 8309774 (+)
G131071 NA non-coding downstream 32231 8486471 ~ 8497992 (+)
G131108 NA non-coding downstream 66534 8520774 ~ 8521442 (+)
G131859 NA non-coding downstream 116862 8571102 ~ 8571332 (+)
G131861 NA non-coding downstream 118058 8572298 ~ 8572531 (+)
G131872 NA non-coding downstream 119231 8573471 ~ 8573841 (+)
G130967 NA other upstream 264940 8188374 ~ 8189073 (+)
G130552 NA other upstream 1357361 7095053 ~ 7096652 (+)
G128757 NA other upstream 2127228 6326196 ~ 6326785 (+)
G128601 NA other upstream 2462252 5983879 ~ 5991761 (+)
G131077 NA other downstream 47168 8501408 ~ 8506787 (+)
G132667 NA other downstream 1114499 9568739 ~ 9569160 (+)
G133192 NA other downstream 1705579 10159819 ~ 10161961 (+)
CI01000026_11075931_11078249 MDK, MDKA other downstream 2616528 11075784 ~ 11079080 (+)
CI01000026_11241496_11246081 NA other downstream 2790693 11241496 ~ 11246204 (+)

Expression


Co-expression Network