G131088


Basic Information

Item Value
gene id G131088
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 8410642 ~ 8410884 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU149080
CAGGAAGGGGCCATCCCCAAACTGTTCCCACAAAGTTGGGAGCATGAAATTGTCCAAAATGTCTTGGTATGCTGAAGCATTAAGAGTTCCTTTCACTGGAACTAAGGGGCCAAGCCCAACCCCTGAAAAACAACCCTACACCATAATCCCCCCTCCACCAAACTTTACACTTGGCACAATGCAGTCAGGCAAGTACCGTTCTCCTGGCAACCGCCAAACCCAGACTCGTCCATCGGATTGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU149080 True 243 lncRNA 0.51 1 8410642 8410884

Neighbor

gene id symbol gene type direction distance location
CI01000026_08313929_08318869 ATP6V0D1, ATP6V0D1.L coding upstream 91751 8311795 ~ 8318891 (+)
CI01000026_08297901_08307596 CTRB1 coding upstream 103013 8297857 ~ 8307629 (+)
CI01000026_08248451_08250136 DDX28 coding upstream 160421 8248371 ~ 8250221 (+)
CI01000026_08107438_08129873 ESRP2 coding upstream 280162 8107438 ~ 8130480 (+)
CI01000026_08103907_08104974 NA coding upstream 305043 8103814 ~ 8105599 (+)
CI01000026_08421799_08434134 ZDHHC1 coding downstream 10799 8421683 ~ 8434193 (+)
CI01000026_08447474_08449558 TPPP3 coding downstream 36512 8447396 ~ 8450611 (+)
CI01000026_08454661_08461606 NA coding downstream 43777 8454661 ~ 8461921 (+)
CI01000026_08474877_08483134 NA coding downstream 63993 8474877 ~ 8483268 (+)
CI01000026_08944583_08947981 NA coding downstream 533642 8944526 ~ 8947993 (+)
G131015 NA non-coding upstream 77927 8332107 ~ 8332715 (+)
G131048 NA non-coding upstream 98893 8311533 ~ 8311749 (+)
G131046 NA non-coding upstream 100868 8309566 ~ 8309774 (+)
G131007 NA non-coding upstream 113472 8294607 ~ 8297170 (+)
G131098 NA non-coding downstream 43129 8454013 ~ 8454240 (+)
G131071 NA non-coding downstream 75587 8486471 ~ 8497992 (+)
G131108 NA non-coding downstream 109890 8520774 ~ 8521442 (+)
G131859 NA non-coding downstream 160218 8571102 ~ 8571332 (+)
G131861 NA non-coding downstream 161414 8572298 ~ 8572531 (+)
G130967 NA other upstream 221569 8188374 ~ 8189073 (+)
G130552 NA other upstream 1313990 7095053 ~ 7096652 (+)
G128757 NA other upstream 2083857 6326196 ~ 6326785 (+)
G128601 NA other upstream 2418881 5983879 ~ 5991761 (+)
G131077 NA other downstream 90524 8501408 ~ 8506787 (+)
G132667 NA other downstream 1157855 9568739 ~ 9569160 (+)
G133192 NA other downstream 1748935 10159819 ~ 10161961 (+)
CI01000026_11075931_11078249 MDK, MDKA other downstream 2659884 11075784 ~ 11079080 (+)
CI01000026_11241496_11246081 NA other downstream 2834049 11241496 ~ 11246204 (+)

Expression


Co-expression Network