Gene
RNA
| Item | Value |
|---|---|
| gene id | G133994 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000026 |
| NCBI id | null |
| chromosome length | 17172400 |
| location | 11358436 ~ 11358728 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU152370 | True | 293 | lncRNA | 0.23 | 1 | 11358436 | 11358728 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000026_11353172_11356717 | SLC22A18 | coding | downstream | 1706 | 11352471 ~ 11356730 (-) |
| CI01000026_11308038_11346628 | OTOG | coding | downstream | 11808 | 11307902 ~ 11346628 (-) |
| CI01000026_11280159_11287703 | NA | coding | downstream | 70733 | 11279171 ~ 11287703 (-) |
| CI01000026_11226603_11231478 | SLC8B1 | coding | downstream | 126958 | 11226603 ~ 11231478 (-) |
| CI01000026_11215228_11222347 | SNX1B | coding | downstream | 136089 | 11214887 ~ 11222347 (-) |
| CI01000026_11363296_11365242 | NA | coding | upstream | 3363 | 11362091 ~ 11365242 (-) |
| CI01000026_11367029_11386064 | NA | coding | upstream | 8087 | 11366815 ~ 11386064 (-) |
| CI01000026_11481190_11482991 | NA | coding | upstream | 122353 | 11481081 ~ 11482991 (-) |
| CI01000026_11488673_11493122 | GRPEL1 | coding | upstream | 129223 | 11487951 ~ 11493122 (-) |
| CI01000026_11682328_11694593 | SHRPRBCK1R, SHARPIN | coding | upstream | 322939 | 11681667 ~ 11695000 (-) |
| G133828 | NA | non-coding | downstream | 8848 | 11349312 ~ 11349588 (-) |
| G133802 | NA | non-coding | downstream | 51255 | 11301915 ~ 11307181 (-) |
| G133990 | NA | non-coding | downstream | 93124 | 11265084 ~ 11265312 (-) |
| G133981 | NA | non-coding | downstream | 117981 | 11237245 ~ 11240455 (-) |
| G133837 | NA | non-coding | downstream | 146859 | 11209845 ~ 11211577 (-) |
| G133999 | NA | non-coding | upstream | 62042 | 11420770 ~ 11421068 (-) |
| G134000 | NA | non-coding | upstream | 62629 | 11421357 ~ 11421556 (-) |
| G134001 | NA | non-coding | upstream | 66272 | 11425000 ~ 11425310 (-) |
| G134002 | NA | non-coding | upstream | 67064 | 11425792 ~ 11426017 (-) |
| G134006 | NA | non-coding | upstream | 92398 | 11451126 ~ 11451341 (-) |
| G133790 | NA | other | downstream | 520831 | 10834015 ~ 10859589 (-) |
| CI01000026_10788054_10788652 | CD59 | other | downstream | 568282 | 10787339 ~ 10789709 (-) |
| CI01000026_10347872_10351783 | CEBPA | other | downstream | 1009479 | 10347746 ~ 10351783 (-) |
| G132721 | NA | other | downstream | 1807792 | 9550030 ~ 9550644 (-) |
| G136110 | NA | other | upstream | 3196189 | 14554917 ~ 14555436 (-) |
| CI01000026_16756776_16760261 | RBPMS2A, RBPMS2B, RBPMS2 | other | upstream | 5398001 | 16756729 ~ 16761341 (-) |
| G137667 | NA | other | upstream | 5447636 | 16806364 ~ 16808372 (-) |
| G137914 | NA | other | upstream | 5624523 | 16983251 ~ 16984352 (-) |
| G137967 | NA | other | upstream | 5709620 | 17068348 ~ 17069433 (-) |
