XLOC_008499 (klc3)


Basic Information

Item Value
gene id XLOC_008499
gene name klc3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 23657051 ~ 23677446 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00017005
AAATAGTGTGAACTGACGGATCAGGTAAGAGCTGTTAATTTATCCTGTCTGCGACACAACAGCAGGTGAATGAATGACCGCAACCGAGGCTTTACTTGGTTATTTTACCCCCATTGTTGACCTCTACATCATGGAATTAAAGATGTAATGTGGAATATTCCACTCGGAATTCTCTGGCTTTGAGTTTTGACGCGTCGCAGACTCTTGTCTGACTTGCAGCAGCTTTGCATCTTTACTGTGAATTAAGGGTCTGAGTGTCAGACATGCTGTCAGGGGAGGAGATCTTATGCAGCACCCAGCAGGTGATCGCGGGGCTGGAGGCTCTTCGTGGAGAGAACCGCACACTTCTGGACAGCCTGCAGGAAACACTCCAGAGCCAGACGTCCAGTGAGAGCAGCCTGGAGCAGGAGAAGACCAGCATAATTCTAGAGTCTCTGGAGAGGATCGAGCTGGGCTTAGGAGAGGCGCAAGTGATGATGGCACTGTCGGCACACCTGGGCTCTTTAGAGGCCGAGAAGCAGAAGCTGCGTGCTCAGGTGCGGAGGCTGTGCCAGGAGAACCAGTGGCTACGGGATGAACTGTCCCGAGCACAGCAGCAGCTGCAGGAGAGAGAGCAGGAGGTGGTGACTTTAGAGGAGCAGAACAGACACCTGCAGTTCATGAGCAGCATTCGCAAGTACGACCACGAAGAGACGTCTCTGGAGGATAAAGATTCTACTTCAGGAAAGGAGTCCCTTGATGATCTCTTTCCTACAGAAGAAGAGGAGCAGACTCACATGTCTCAGCCACACAGTAGTGCTGCCGCTGCTGCCCAGCAGGGAGGATATGAGATCCCTGCACGACTGCGAACGCTCCACAACCTGGTGATCCAGTACGCCTCCCAGGGCCGATATGAGGTGGCCGTGCCGCTCTGCAAACAAGCTTTAGAGGACCTGGAGAAATCCTCAGGCCACAGCCATCCGGATGTTGCCACCATGCTCAATATCCTGGCTTTAGTGTACAGAGATCAGAACAAATACAAAGAAGCTGCCAGTCTCCTAAATGATGCATTGGCCATCCGTGAGAAGACCCTGGGCATGGACCATCCAGCAgtGGCAGCTACTCTAAATAACCTGGCTGTATTATATGGAAAAAGGGGGAAGTACAAAGAGGCAGAGCCATTGTGTAAAAGAGCTCTGGAGATCAGAGAAAAGGTTCTTGGGACGGATCATCCCGATGTAGCGAAGCAGCTAAATAACTTGGCCCTGCTGTGCCAGAACCAGGGCAAATACCAGGAGGTGGAGCAGTACTATGAACGAGCGCTGCACATTTACCAGAGCCAGCTCGGACCTGATGATGCCAATGTGGCCAAGACCAAGAACAACCTGGCCTCCTGCTACCTCAAGCAGGGAAAATACAGACAAGCTGAGGCTCTTTATAAAGAGATTCTGACTCGAGCTCATGAGAAGGAGTTTGGCTCAGTGGAGGGAGATGGACGGCCTGTCTGGATACATACCGAAGAGGGAAGCTCTAGACCGGACGGTCTGGGAAACCTGAAGCGCAGCGGATCATTTACTAAACTTCGAGAGTCCATACGACGAAGCAGCGAAAAACTAGTTCGGAAGCTAAAAGGAGTCGGAACACAAGAAACAACCCCTCGAGCTGTTGGGATGAAAAGAGCCAATTCTCTCAATGTGCTTAATGTGGGTGTCAAAGACAATCAAGAGGCTGCTATGATGCCCAAGAGGCTGACAGACGCTCGGGGTCTGAGTTCCAGCACACAGAGTTTGGCTCGTCGAGCGTCTCTGACCGGAGACAGTTAACCTTCAGCCACATCAGCTTCAGGATCTACCACATCTCACTGGTCTGTAATGACTGCAGATCATATTTGATAATGATATGAGAAATAGTGTGTGTGATCGATTCAGAACTCCCTGAAACACACATTTAATTGCAGTCCGTCAAAGCACACTTCGACatatttcaaaaaaa

Function

symbol description
klc3 Predicted to be located in cytoplasm and microtubule. Predicted to be part of kinesin complex. Orthologous to human KLC3 (kinesin light chain 3).

GO:

id name namespace
GO:0005856 cytoskeleton cellular_component
GO:0005871 kinesin complex cellular_component
GO:0005874 microtubule cellular_component
GO:0005737 cytoplasm cellular_component
GO:0003777 microtubule motor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060929-772 Predicted to be located in cytoplasm and microtubule. Predicted to be part of kinesin complex. Orthologous to human KLC3 (kinesin light chain 3).

Ensembl:

ensembl_id ENSDARG00000055965

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00017005 True 1971 mRNA 0.51 14 23657051 23677446

Neighbor

gene id symbol gene type direction distance location
XLOC_008498 MARK4 coding upstream 15535 23550890 ~ 23641516 (+)
XLOC_008497 si:dkey-182i3.9 coding upstream 114907 23523337 ~ 23542144 (+)
XLOC_008496 NA coding upstream 151394 23467984 ~ 23505657 (+)
XLOC_008495 phykpl coding upstream 205602 23443665 ~ 23451449 (+)
XLOC_008494 CR847979.1 coding upstream 278863 23378071 ~ 23378188 (+)
XLOC_008500 sae1 coding downstream 45174 23722620 ~ 23739104 (+)
XLOC_008501 ift20 coding downstream 107396 23784842 ~ 23790172 (+)
XLOC_008502 si:ch211-167j9.4 coding downstream 122015 23799461 ~ 23801499 (+)
XLOC_008503 si:ch1073-145m9.1 coding downstream 234209 23911655 ~ 23918483 (+)
XLOC_008504 myo18ab coding downstream 270486 23947932 ~ 24120921 (+)
XLOC_008463 BX663520.1 misc upstream 2404769 21252191 ~ 21252282 (+)
XLOC_008492 NA non-coding upstream 388674 23266658 ~ 23268377 (+)
XLOC_008490 NA non-coding upstream 449587 23207159 ~ 23207464 (+)
XLOC_008488 NA non-coding upstream 1095914 22541344 ~ 22561137 (+)
XLOC_008505 NA non-coding downstream 322123 23999569 ~ 24005283 (+)
XLOC_008506 NA non-coding downstream 455108 24132554 ~ 24132837 (+)
XLOC_008507 NA non-coding downstream 472522 24149968 ~ 24162100 (+)
XLOC_008508 NA non-coding downstream 502486 24179932 ~ 24205981 (+)
XLOC_008509 NA non-coding downstream 514264 24191710 ~ 24198497 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000072_03189624_03195527 KLC3 coding CI01000072 null 3189551 ~ 3195527 (-)
bowfin (Amia calva) AMCG00013590 klc3,LOC108425834,LOC106580868 coding CM030125.1 CM030125.1 37139369 ~ 37151861 (-)