CI01000027_00058562_00058846


Basic Information

Item Value
gene id CI01000027_00058562_00058846
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 58562 ~ 58846 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_00058562_00058846.mRNA
TTCCTCCGACCACACTGCTGTACACTAAAAGTGACGTGAAGCTCGGTGTTGAAAACACCCTCATCTGTTTGGTGACCCACTTTCACCCGCCGCCTGTGAATATCTCCTGGACCAGGAACGGAGAGCCGGTGAGTGAGCTGGACGTCAGTGAGACGCAGTATTACTCCAACCCGGACTTCAGCTTTCGCATTTTCTCCTACCTGAACTTCAGTCCTGAGCGGGGAGACATTTACGCCTGCACCGTACGACACCGGGGACTGCAGGAGGAAATCACCAGGTTCTGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_00058562_00058846.mRNA True 285 mRNA 0.55 1 58562 58846

Neighbor

gene id symbol gene type direction distance location
CI01000027_00060015_00076918 BRD2B, BRD2A, BRD2 coding upstream 1169 60015 ~ 77028 (-)
CI01000027_00078634_00087807 TAP1 coding upstream 19646 78492 ~ 88719 (-)
CI01000027_00108990_00118237 NA coding upstream 49273 108119 ~ 118408 (-)
CI01000027_00131884_00132650 NA coding upstream 72549 131395 ~ 132650 (-)
CI01000027_00137910_00141799 NA coding upstream 78446 137292 ~ 144599 (-)
G139080 NA non-coding downstream 12010 39325 ~ 46552 (-)
G139111 NA non-coding upstream 22784 81630 ~ 81911 (-)
G139089 NA non-coding upstream 62652 121498 ~ 122505 (-)
G139138 NA non-coding upstream 86535 145381 ~ 145786 (-)
G139117 NA other upstream 175366 234212 ~ 237579 (-)
CI01000027_01241417_01245177 NA other upstream 1185789 1240478 ~ 1246267 (-)
CI01000027_01303308_01319462 NR2F5, NR2F1, NR2F1.L, NR2F2 other upstream 1243188 1302034 ~ 1321178 (-)

Expression


Co-expression Network