Gene
RNA
| Item | Value |
|---|---|
| gene id | G139138 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000027 |
| NCBI id | null |
| chromosome length | 10680226 |
| location | 145381 ~ 145786 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU158115 | True | 210 | lncRNA | 0.27 | 2 | 145381 | 145786 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000027_00137910_00141799 | NA | coding | downstream | 2104 | 137292 ~ 144599 (-) |
| CI01000027_00131884_00132650 | NA | coding | downstream | 12731 | 131395 ~ 132650 (-) |
| CI01000027_00108990_00118237 | NA | coding | downstream | 26973 | 108119 ~ 118408 (-) |
| CI01000027_00078634_00087807 | TAP1 | coding | downstream | 56662 | 78492 ~ 88719 (-) |
| CI01000027_00060015_00076918 | BRD2B, BRD2A, BRD2 | coding | downstream | 68353 | 60015 ~ 77028 (-) |
| CI01000027_00178291_00179467 | EXT1B, EXT1A, EXT1, EXTL1 | coding | upstream | 32505 | 178289 ~ 179471 (-) |
| CI01000027_00332200_00343377 | NA | coding | upstream | 186196 | 331982 ~ 344039 (-) |
| CI01000027_00645077_00650763 | SLC25A32B, SLC25A32 | coding | upstream | 499208 | 644241 ~ 651285 (-) |
| CI01000027_00701871_00719591 | COL28A1B | coding | upstream | 555980 | 701766 ~ 719591 (-) |
| CI01000027_00742700_00758723 | COL28A1B | coding | upstream | 596845 | 742631 ~ 758723 (-) |
| G139089 | NA | non-coding | downstream | 22876 | 121498 ~ 122505 (-) |
| G139111 | NA | non-coding | downstream | 63470 | 81630 ~ 81911 (-) |
| G139080 | NA | non-coding | downstream | 98829 | 39325 ~ 46552 (-) |
| G139123 | NA | non-coding | upstream | 63946 | 209732 ~ 216101 (-) |
| G139154 | NA | non-coding | upstream | 92887 | 238673 ~ 239396 (-) |
| G139155 | NA | non-coding | upstream | 93654 | 239440 ~ 239676 (-) |
| G139158 | NA | non-coding | upstream | 95058 | 240844 ~ 241126 (-) |
| G139117 | NA | other | upstream | 88426 | 234212 ~ 237579 (-) |
| CI01000027_01241417_01245177 | NA | other | upstream | 1098849 | 1240478 ~ 1246267 (-) |
| CI01000027_01303308_01319462 | NR2F5, NR2F1, NR2F1.L, NR2F2 | other | upstream | 1156248 | 1302034 ~ 1321178 (-) |
| CI01000027_02119227_02124423 | NA | other | upstream | 1976344 | 2119131 ~ 2125142 (-) |
| CI01000027_02226447_02227499 | NA | other | upstream | 2080839 | 2225781 ~ 2227499 (-) |
