CI01000027_01354194_01354663 (BOLA1)


Basic Information

Item Value
gene id CI01000027_01354194_01354663
gene name BOLA1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 1354042 ~ 1354663 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_01354194_01354663.mRNA
GTGGTCTCCTGTGCCTGATGCTGTCCAGTGCTCTCCGCTGCCTGCGTCCCTCATCCTGCACCCTTGCCTTATCCAGACAGCTGGCTCATCACCGGCCCCACATGGATCCCAGTAGTCCCCGTCCTGTAGAGACCACCATACGGACCAAACTGACCCAGGCCCTCGCACCTGAGCACCTGGAGGTCATAAATGAGAGTCACATGCACGCTGTGCCCCCTGGTTCAGAGTCCCACTTCAGAGTTCTGGTGGTGAGTCCTCAGTTTGAGGGTCTTTCCCTCTTACAGCGTCATCGGCTTGTAAACGAGACCCTGCGGGAGGAGCTCAGCACCTGCGTTCATGCCCTCGCCATCCAGGCTAAGACGCCCCAGCAGTGGAGCAGCAACCCTAGCCTGGCCAAAAGCCCCCCGTGCATGGGAGGATCCAAACATGATGACACAATGACTGAGAAACTGAAGGCGGGTCGAGACTGACTGTGTTTCAGTTCAGAAACAAAAACTGTTTAGGGGTATTATAATACTTGGATATGAAGTGAGTTAATTAGTTGCACATGCATATCTTTCATGTGGAGCTGACCGACACTAATGCTCAATATTTAAATGACTTCAATACAAATATTAATAAA

Function

symbol description
bola1 Predicted to be active in mitochondrion. Orthologous to human BOLA1 (bolA family member 1).

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG:

id description
K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_01354194_01354663.mRNA True 622 mRNA 0.52 1 1354042 1354663

Neighbor

gene id symbol gene type direction distance location
CI01000027_01327656_01344105 NA coding downstream 9194 1327626 ~ 1344848 (-)
CI01000027_01303308_01319462 NR2F5, NR2F1, NR2F1.L, NR2F2 coding downstream 32864 1302034 ~ 1321178 (-)
CI01000027_01289962_01294748 NA coding downstream 59227 1289860 ~ 1294815 (-)
CI01000027_01254220_01254900 NA coding downstream 99091 1254129 ~ 1254951 (-)
CI01000027_01249889_01250572 RPZ coding downstream 103463 1249462 ~ 1250579 (-)
CI01000027_01361532_01381534 SV2A coding upstream 6625 1361288 ~ 1382766 (-)
CI01000027_01420180_01439837 MTMR11 coding upstream 65459 1420122 ~ 1439837 (-)
CI01000027_01466387_01475758 OTUD7B coding upstream 110884 1465547 ~ 1475758 (-)
CI01000027_01499088_01500312 RBM8A coding upstream 144377 1499040 ~ 1502028 (-)
CI01000027_01587854_01598407 NA coding upstream 233075 1587738 ~ 1598446 (-)
G139514 NA non-coding downstream 20504 1333312 ~ 1333538 (-)
G139443 NA non-coding downstream 28781 1324926 ~ 1325261 (-)
G139436 NA non-coding downstream 55255 1296520 ~ 1298787 (-)
G139432 NA non-coding downstream 77552 1276290 ~ 1276490 (-)
G139424 NA non-coding downstream 110329 1241803 ~ 1243713 (-)
G139457 NA non-coding upstream 106517 1461180 ~ 1462825 (-)
G139498 NA non-coding upstream 108330 1462993 ~ 1463312 (-)
G139487 NA non-coding upstream 196422 1551085 ~ 1557170 (-)
G139553 NA non-coding upstream 253715 1608378 ~ 1609068 (-)
G139567 NA non-coding upstream 488713 1843376 ~ 1843598 (-)
CI01000027_01241417_01245177 NA other downstream 107065 1240478 ~ 1246267 (-)
G139117 NA other downstream 1116463 234212 ~ 237579 (-)
CI01000027_00131884_00132650 NA other downstream 1220240 131395 ~ 132650 (-)
CI01000027_00108990_00118237 NA other downstream 1235739 108119 ~ 118408 (-)
CI01000027_02119227_02124423 NA other upstream 767467 2119131 ~ 2125142 (-)
CI01000027_02226447_02227499 NA other upstream 871962 2225781 ~ 2227499 (-)
G140118 NA other upstream 2146871 3509352 ~ 3584679 (-)
CI01000027_03787377_03788902 NA other upstream 2432715 3787377 ~ 3790279 (-)
CI01000027_03922380_03931033 NA other upstream 2567733 3922242 ~ 3931033 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_010231 bola1 coding NC_007127.7 CM002900.2 46205693 ~ 46209855 (+)