CI01000027_01254220_01254900


Basic Information

Item Value
gene id CI01000027_01254220_01254900
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 1254129 ~ 1254951 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_01254220_01254900.mRNA
AGACAAGCCTGAAAGACTAGAAGAGCCAAAGTCGAAGATTCAGACCCATCTATGGCAGAAAAAGAGCAGATCAAAGCGACTGCGGTCAAAGTGCTGTGCTATGTGGAGAAAGTCTCCTCCTTCGCCTCCTCCATAGATCCTCTCTTCGGGATTGTGACTTCAGTAGTCGGGATCGTCAAGAAAGGCCTCGTGGATGAGGAGGACCATGAGATGCACAAAGACTTCCAACAGGTCCACGAGAAGCTGGAAACCATCTCAGAGAAGAACAAGAAGGTGCTCCAACAGATCCGCATTGACGAGATCAATGAGAATTTCGGTAAACACGAGGAAGTCATCAAGCATCAGTACGGTGCTTTCAACACCATGGTGGAAAGAGTAAAACTGGACCCTGAAAACTCGGATCACCACATGCAGGAGTTTGTGAAGATATACGAGAAGGACCAGAGCGACATGAGCTTAGATGTGTTTTATCGTGGTGTGAAGGGCACCGCTCTGTTCGGGAGGCCTATCCTACAAGTATACCTGGAGGACTGTAAAAGGAACAAAAAGGTGATGGAGGCCCGCTGCTCTCACTTGGCTCACCTGTTTTACATCGGTCTTATGACGCTGATGGCCTACTACGCTGTCACTGAAGATGACGAGGATGAAGTGAGAGACAAATGGGGCCAGAGGGTCATTGAAATTCAAGCCAAGATGCAAGAAGCTCTAAACCAATGCACTGAGGAAAACTGAAGTTGCACTGAACAATTGCTGAGACAAATCCATTTCATGTGCTGAAAGTTTTAATGTTATAAGCAATCTTGAATCAGGAAGTTTTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_01254220_01254900.mRNA True 823 mRNA 0.46 1 1254129 1254951

Neighbor

gene id symbol gene type direction distance location
CI01000027_01249889_01250572 RPZ coding downstream 3550 1249462 ~ 1250579 (-)
CI01000027_01241417_01245177 NA coding downstream 7862 1240478 ~ 1246267 (-)
CI01000027_01232167_01232844 NA coding downstream 19748 1231557 ~ 1234381 (-)
CI01000027_01204940_01206121 RPZ5 coding downstream 47810 1204469 ~ 1206319 (-)
CI01000027_01198110_01199285 RPZ4 coding downstream 53196 1197490 ~ 1200933 (-)
CI01000027_01289962_01294748 NA coding upstream 34909 1289860 ~ 1294815 (-)
CI01000027_01303308_01319462 NR2F5, NR2F1, NR2F1.L, NR2F2 coding upstream 47908 1302034 ~ 1321178 (-)
CI01000027_01327656_01344105 NA coding upstream 72675 1327626 ~ 1344848 (-)
CI01000027_01354194_01354663 BOLA1 coding upstream 99091 1354042 ~ 1354663 (-)
CI01000027_01361532_01381534 SV2A coding upstream 106337 1361288 ~ 1382766 (-)
G139424 NA non-coding downstream 10416 1241803 ~ 1243713 (-)
G139412 NA non-coding downstream 37060 1216870 ~ 1217069 (-)
G139410 NA non-coding downstream 42529 1211385 ~ 1211600 (-)
G139409 NA non-coding downstream 43665 1210246 ~ 1210464 (-)
G139432 NA non-coding upstream 21339 1276290 ~ 1276490 (-)
G139436 NA non-coding upstream 41569 1296520 ~ 1298787 (-)
G139443 NA non-coding upstream 69975 1324926 ~ 1325261 (-)
G139514 NA non-coding upstream 78361 1333312 ~ 1333538 (-)
G139457 NA non-coding upstream 206229 1461180 ~ 1462825 (-)
G139117 NA other downstream 1016550 234212 ~ 237579 (-)
CI01000027_00131884_00132650 NA other downstream 1120327 131395 ~ 132650 (-)
CI01000027_00108990_00118237 NA other downstream 1135826 108119 ~ 118408 (-)
CI01000027_02119227_02124423 NA other upstream 867179 2119131 ~ 2125142 (-)
CI01000027_02226447_02227499 NA other upstream 971674 2225781 ~ 2227499 (-)
G140118 NA other upstream 2246583 3509352 ~ 3584679 (-)
CI01000027_03787377_03788902 NA other upstream 2532427 3787377 ~ 3790279 (-)

Expression


Co-expression Network