CI01000027_01232167_01232844


Basic Information

Item Value
gene id CI01000027_01232167_01232844
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 1231557 ~ 1234381 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_01232167_01232844.mRNA
ATATGTATCATTCAAAATTTGAATTGTGTTTTTTTAATTATTCAGATCAGAATTGTACATTAAGATTTGATAAAACAACTCATGATCTATTCCATATCACTATTTTAAATGAGTGTTTACCATTGTGCTTATCTCAACTCTATCAGGTTCTTGAAAATACATTTATTTATGATATCAAGCAAACTGCCTTCATCCCAAAAGACACTTCAATGTAAGTGCCCATTTTTAGATTACATTATTGGGAAATTTCAATAAAATATTTACTCACCCTTGTGTCATTCCAAATCTGCATGATGGTTTCTGCAGTTTTTGTTTTTCTGTGGAACACAAAAGAAGAATTTTAGAATTCTTCAGCTATTTTCCATACAAAAACAGCTCACAGTGACCACATCCATTCTCCAAAAGGACAAAAAAGCTATATAAAACTAGTCCATAGGCTATGTTTTATGTGCTCCAGACAGGCTGTCAGGCTGTGCATTAGTGGCAGGAAATTTTCAGTGATTATTCTGCAAGTTAGATACACCAGTAGGTGGCGACAAATGACTGTTTTTAATGAAAAAAATGAATCATTCATTCAACAGATTCATTCAAATAAAATAGCTTTTTAATTAATGAAAGGAGCTACTAGGTGTGTTCTACTTGAAGCGGCGCTGTGCAGACCGATCAGTGTATGACATCAAAATACTGCAAGAGCGGTTAGAGAGCAGATGGCTCCGCTTGCTTTCGAATCGCTTGCGTGGTACTTTGTCATACACAGATCGGATTATGCAGTCGAACACACTGCATCTGAAAGCTTAAAAATGCTGCCTTCGGAGGTGCATTCCATGGTAGGAAGGCATCAAGGCACGCTTGCGCTTATGCTGCCTCAGAAGTCTGTCCAAAATCAGTTTCGTGAGGTACCTTCATGCGCAAATGCTGCCTACAAAGTTTTTGCCTGATAGGGCAGCAAGGCAACAGGTCAGCTGTCTAAGCTCTACTGTCTTTTTGAGTGATTCACTGAATCAGTCCGCCAAACAATTCGTTCAAAAACACAAGCTGATTCATTCTGGAACGAAACTAGTGACCGTCTTTATGAGTGAGTCATTGAATCATTCATTCAACCAATTTGTTCAAAAATGCTTATTCATTCAAGAATGAAACAAGCAACTCTCTTTATGAGTGAGTCATTAAATCATTCATTTAAACGATTCCTTCAAAAACGCTGATACATTTGGGAAGGAAACATGCTGCAGTATGCTGCACGGAGATGCCAGTAGCCTCATGGATATATGAGATTGTGAATATGAGATCAGGAATGATGATACAAGAAGTGTGTATGAGGAACAGAAAATGTTAATTATTGTTCATATGGACAACTTTGAACAATTTTTGAAGAAACGTCATGCAGCTGCTTTCTATACTCATGAGCTTGTTGTATAGTAAGGAGCTCTGTAAAGAGTCTTCTAACTAAATAACAGAATTTTAACAGCATATTGTGTGTCTTTGTGTCATCAGTTTCTTCTTCAGGTAAACATCACTGGCTCTTCCTCCAGACGCAATGGCTGAAAATGAGATCTTAGAAGACCCAGAGAAGCTGAAGAGGGGCCTTGTGAAGGTTCTAGAATGTGTGGCCACCATCTCGTCAGCAGCAGCGGTGGTCAATCCCATCTTCGGTGTGGCGGGCTCTCTCATCCGGGTGGTGCTGCACCATGTGGACGATGAAGACATTCAGAAACTCAAACGTGAGTTTGGCAGCGTGAATCGAGCCCTGGATGAAATCTCACAGCAGAACCAGAATGTATTGCTTCAGATCAGGAAGGAGACGGTGGATGGCCTGTACTGTCGTGTAGAAGAAAACATTCGCAATCAGTTCTGCAAATTCATGGACACCGTGGAGGCAACGGCAGCACACGAACAGCGCAGGAAGGAATTTGAAATGAGCTTTGTGATCAATCAGTGTGACCAGAACCTGCACACACTGTATGGTGCTGTGATGGGCGAATCAAAGATCTTCAGCCAGCCCATCCTAGAGGTGTACATGAAACATTCACAGGGTGACCAGCGCGTTATGGAGAACCTCTGCACACGACTCACATACCTGTTCTGCATCGGCCTCATTGCTCTCATGAGTTATGCTGCCATCGTCGGAGATGATGAGAAAGCTTTGAGCATCGAGTGGGAAGAGAAAATGAAAGATGTGGCCAAAAAAATGTCAGAAGTGCTGATCACTTATTAGTGACTTTAACCCACTTGACTTTTTACCCCACTTTTCTTCATCTATCTTTCTGTCTTCTCTGTCTATTTTATTTGTCAATGCACTAGCAACTAATAAAAGAAAATCACAACAACTACCTAGCAATGGTCTCACAACCTCTCAAAACCTCTGTAACCCCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATATCCTAGCAACCACCTATCAACCACTCAAAACAATGTAGCATCTGCTTAGCAATTGCCTTGCAACCACCATGAACAACCTGTTAACCCATTCCTAATGTGTACCTGCAAATATTTGCACTTGTGAAACAAAAGTTATATGATACTGTGATGCAGTGATATTATTTTCTGACTATTTTCATCTTTCTCTACATTCTACTACATTAGCTCAAACTTAATCTGCCCAAGCCAAAGTCAAAATAATAACTTTTCTTTAATGTCAATTGATGTTACAAATCTGTAATCCTAATGACTTACATAGCCTTAAACTATTTTTTTTCTGTAAATCTCTATCTCTCTAGAATAACATTCTATTGTTATATTCTTCTAGCATTGTCTCAAGTACTATGTAGAATTATGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_01232167_01232844.mRNA True 2825 mRNA 0.39 1 1231557 1234381

Neighbor

gene id symbol gene type direction distance location
CI01000027_01204940_01206121 RPZ5 coding downstream 25238 1204469 ~ 1206319 (-)
CI01000027_01198110_01199285 RPZ4 coding downstream 30624 1197490 ~ 1200933 (-)
CI01000027_01111716_01114630 NA coding downstream 115997 1111678 ~ 1115560 (-)
CI01000027_01082314_01087880 UBQL4, XDRP1, UBQLN1, UBQLN4 coding downstream 142953 1081949 ~ 1088604 (-)
CI01000027_01078554_01079951 MAPIP, ROBLD3-PS1, LAMTOR2.L, LAMTOR2.S, LAMTOR2 coding downstream 151606 1078436 ~ 1079951 (-)
CI01000027_01241417_01245177 NA coding upstream 6956 1240478 ~ 1246267 (-)
CI01000027_01249889_01250572 RPZ coding upstream 15081 1249462 ~ 1250579 (-)
CI01000027_01254220_01254900 NA coding upstream 19748 1254129 ~ 1254951 (-)
CI01000027_01289962_01294748 NA coding upstream 55479 1289860 ~ 1294815 (-)
CI01000027_01303308_01319462 NR2F5, NR2F1, NR2F1.L, NR2F2 coding upstream 68478 1302034 ~ 1321178 (-)
G139412 NA non-coding downstream 14488 1216870 ~ 1217069 (-)
G139410 NA non-coding downstream 19957 1211385 ~ 1211600 (-)
G139409 NA non-coding downstream 21093 1210246 ~ 1210464 (-)
G139406 NA non-coding downstream 70913 1160392 ~ 1160644 (-)
G139405 NA non-coding downstream 71292 1160046 ~ 1160265 (-)
G139424 NA non-coding upstream 7422 1241803 ~ 1243713 (-)
G139432 NA non-coding upstream 41909 1276290 ~ 1276490 (-)
G139436 NA non-coding upstream 62139 1296520 ~ 1298787 (-)
G139443 NA non-coding upstream 90545 1324926 ~ 1325261 (-)
G139117 NA other downstream 993978 234212 ~ 237579 (-)
CI01000027_00131884_00132650 NA other downstream 1097755 131395 ~ 132650 (-)
CI01000027_00108990_00118237 NA other downstream 1113254 108119 ~ 118408 (-)
CI01000027_02119227_02124423 NA other upstream 887749 2119131 ~ 2125142 (-)
CI01000027_02226447_02227499 NA other upstream 992244 2225781 ~ 2227499 (-)
G140118 NA other upstream 2267153 3509352 ~ 3584679 (-)

Expression


Co-expression Network