Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000027_01966516_01972432 |
| gene name | NA |
| gene type | misc |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000027 |
| NCBI id | null |
| chromosome length | 10680226 |
| location | 1966244 ~ 1973211 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| hypothetical protein cypCar_00047168 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000027_01966516_01972432.mRNA | False | 1405 | mRNA | 0.44 | 3 | 1966244 | 1973211 |
| TU158541 | True | 568 | lncRNA | 0.41 | 1 | 1966593 | 1967160 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000027_01855521_01856799 | NA | coding | downstream | 109388 | 1855352 ~ 1856856 (-) |
| CI01000027_01832797_01839912 | DNASE2 | coding | downstream | 126332 | 1832496 ~ 1839912 (-) |
| CI01000027_01799404_01801967 | NA | coding | downstream | 164153 | 1799058 ~ 1802091 (-) |
| CI01000027_01775507_01793407 | PHF1 | coding | downstream | 172837 | 1775495 ~ 1793407 (-) |
| CI01000027_01651455_01676579 | SYNGAP1B | coding | downstream | 289665 | 1650811 ~ 1676579 (-) |
| CI01000027_02119227_02124423 | NA | coding | upstream | 145920 | 2119131 ~ 2125142 (-) |
| CI01000027_02147653_02152768 | NA | coding | upstream | 174346 | 2147557 ~ 2153486 (-) |
| CI01000027_02226447_02227499 | NA | coding | upstream | 252570 | 2225781 ~ 2227499 (-) |
| CI01000027_02240021_02241453 | NA | coding | upstream | 266785 | 2239996 ~ 2241453 (-) |
| CI01000027_02314898_02317288 | NA | coding | upstream | 341340 | 2314551 ~ 2317308 (-) |
| G139460 | NA | non-coding | downstream | 22208 | 1937797 ~ 1944036 (-) |
| G139583 | NA | non-coding | downstream | 28915 | 1937097 ~ 1937329 (-) |
| G139461 | NA | non-coding | downstream | 88870 | 1876706 ~ 1877374 (-) |
| G139486 | NA | non-coding | downstream | 95374 | 1865184 ~ 1870870 (-) |
| G139569 | NA | non-coding | downstream | 120750 | 1845237 ~ 1845494 (-) |
| G139493 | NA | non-coding | upstream | 646 | 1973857 ~ 1976949 (-) |
| G139595 | NA | non-coding | upstream | 42057 | 2015268 ~ 2015493 (-) |
| G139446 | NA | non-coding | upstream | 90915 | 2064126 ~ 2065879 (-) |
| G139462 | NA | non-coding | upstream | 98879 | 2072090 ~ 2077562 (-) |
| G139617 | NA | non-coding | upstream | 132808 | 2106019 ~ 2106972 (-) |
| CI01000027_01303308_01319462 | NR2F5, NR2F1, NR2F1.L, NR2F2 | other | downstream | 646083 | 1302034 ~ 1321178 (-) |
| CI01000027_01241417_01245177 | NA | other | downstream | 719267 | 1240478 ~ 1246267 (-) |
| G139117 | NA | other | downstream | 1728665 | 234212 ~ 237579 (-) |
| CI01000027_00131884_00132650 | NA | other | downstream | 1832442 | 131395 ~ 132650 (-) |
| CI01000027_00108990_00118237 | NA | other | downstream | 1847941 | 108119 ~ 118408 (-) |
| G140118 | NA | other | upstream | 1528323 | 3509352 ~ 3584679 (-) |
| CI01000027_03787377_03788902 | NA | other | upstream | 1814167 | 3787377 ~ 3790279 (-) |
| CI01000027_03922380_03931033 | NA | other | upstream | 1949185 | 3922242 ~ 3931033 (-) |
