CI01000027_02240021_02241453


Basic Information

Item Value
gene id CI01000027_02240021_02241453
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 2239996 ~ 2241453 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_02240021_02241453.mRNA
ATGGAGATTCTGGGCAGCACTTTTGATGATTCTGTGTTTGAGCAGTCACGGAACAGAGTCTCAGCTGCTCTGCCCACATACGAGCCCAAACTCTGCGAACCTCTGGTGGGTAACACACTGAACACTTACAAGAAACTACTGATACTATGGTACAGGAAATGGCACATATATACCCCGCTATTTATGTATGCTACTTCCACCGCAAGGCATTACTATTACGGTATATACATCGAAATGTACTGTGATGTAAATGTCGAGGATGCATTAGAAGAACAAAAAAGCCTCAAGTTTCGAGGTGATCTGGCCTACAGGAGGAAACAGTATCAGGTGGCTCTGGATGAGTATGTGTCCTGCCTCTCTCTGGTACCTGCTGGAAACACATCAGTGAAGAGAGATGTGCTAGAAGGGATCGCACGATGCTGCTGTCATCTGGGGGAAAAAGAAGAGGCTCTAAAAGCCTGCGAGAGACTGAGGACAGAAGTATCCAACACCTGTCACCTCACCTGCGTCCTTCAGCTGGAATTGAGTATTCATGATCACTACAGGGAGCTGGCAAACAGCATCTCCAGCCTGCAGCAGCTGTGCTGCCTTCATCCGTATCATCCATGGCACTGGCTGAATCTGGCCATGAGCTTCCAGAGACTCCTGGAGTCTGATAGTTGTCCTGAGAGATCCAGCACTGAGGAAGAACACGAAAAGCAGCAGGGGACAAATAACATTTTAGCACTAAAGACCATCATGTGCTTGATTAGAACAAGGCTGCTAATTGAAATCCTGCAGATTCAGCAGTTCTCATTCGTGCTGGAGAACAGCCAGAGGGCCCTACAAGACATTGAGGAAGCTTTACATACTCTGCAGCCAACGGAGAAGATGATTCAAACAATCTCTGAGGTCAAACAACAATAAACAGTTTAATAGAGAGGGAAATATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_02240021_02241453.mRNA True 931 mRNA 0.47 5 2239996 2241453

Neighbor

gene id symbol gene type direction distance location
CI01000027_02226447_02227499 NA coding downstream 12497 2225781 ~ 2227499 (-)
CI01000027_02147653_02152768 NA coding downstream 86510 2147557 ~ 2153486 (-)
CI01000027_02119227_02124423 NA coding downstream 115240 2119131 ~ 2125142 (-)
CI01000027_01966516_01972432 NA coding downstream 266785 1966244 ~ 1973211 (-)
CI01000027_01855521_01856799 NA coding downstream 383140 1855352 ~ 1856856 (-)
CI01000027_02314898_02317288 NA coding upstream 73098 2314551 ~ 2317308 (-)
CI01000027_02460101_02470648 DPYS coding upstream 218244 2459265 ~ 2470805 (-)
CI01000027_02742168_02773304 NA coding upstream 500715 2742168 ~ 2773304 (-)
CI01000027_02840202_02843749 NA coding upstream 598029 2839482 ~ 2845691 (-)
CI01000027_02950348_02954214 SQLE, SQLEA coding upstream 708653 2950106 ~ 2954214 (-)
G139620 NA non-coding downstream 84959 2154577 ~ 2155037 (-)
G139482 NA non-coding downstream 98084 2137431 ~ 2141912 (-)
G139617 NA non-coding downstream 133024 2106019 ~ 2106972 (-)
G139462 NA non-coding downstream 162434 2072090 ~ 2077562 (-)
G139446 NA non-coding downstream 174117 2064126 ~ 2065879 (-)
G139659 NA non-coding upstream 54017 2295470 ~ 2296334 (-)
G139704 NA non-coding upstream 181452 2422905 ~ 2423200 (-)
G139705 NA non-coding upstream 184267 2425720 ~ 2426596 (-)
G139717 NA non-coding upstream 229673 2471126 ~ 2493630 (-)
CI01000027_01303308_01319462 NR2F5, NR2F1, NR2F1.L, NR2F2 other downstream 919835 1302034 ~ 1321178 (-)
CI01000027_01241417_01245177 NA other downstream 993019 1240478 ~ 1246267 (-)
G139117 NA other downstream 2002417 234212 ~ 237579 (-)
G140118 NA other upstream 1260081 3509352 ~ 3584679 (-)
CI01000027_03787377_03788902 NA other upstream 1545925 3787377 ~ 3790279 (-)
CI01000027_03922380_03931033 NA other upstream 1680943 3922242 ~ 3931033 (-)
G141481 NA other upstream 2130794 4372247 ~ 4412810 (-)
G141488 NA other upstream 2266022 4507475 ~ 4508971 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location