CI01000027_02840202_02843749


Basic Information

Item Value
gene id CI01000027_02840202_02843749
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 2839482 ~ 2845691 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_02840202_02843749.mRNA
ACAAACACTTTATTATTCTCACTGGGATTTAACGATTCGTACGGCGTTTACCAGCATGTGCGGGTGGAGCGGGACAGTTGAGCTGTTATCAGAGCTCCTCTGTAAATCAACAACAAGCAGAGGTGGTGCTATTCATTTCACAACATACATCAATATTACTGAAACGCGGCCGGCAGACAAGAGCTGATAACTCGGAGGAGTTATGAAGACCTCAGAGGAATACGTCTGTTTCATTACTGAGCTAAATGTGACGCCCGAACAGACTTCTCCCTCGCTGAATCAGCGCGCATCTCTCAAGCTTTGTGTTAGTGACACACACACACTCACAGTGTTCCTGAGGCCTTGAGTTAACCGCAGTCTCTCAATAACTCTCCAGTTGCTAGCCACACTCCTGCTCTCCTGCTCTCTCATTGGTGGAGACGGTGAGCCGAGAGCAAATATGATTGGAGGAGAACATTGATGATTTCAGCAGGAAACTGAACTGAATTACAACACGGAGGAGAGAGAATGAGAGGAAAGAAGAAGAGGTTGGACTGCGTCCCATGTGCTGTGGTGAAGTGAGAGCGCTGTGATTCCGTAGGGAGTCGAGCCACAACAAAATCAGGTCAGACTCATTTGTTTTAATACACTGTAATGAGTCGGAGGTCAGCAGAACTACTCTCACTTCAGACCACTGACCTTGAGATCTCATGATCAACAAACACACACAAAAACAAGGAATATCTTAAGCCCTGTGATGTGACAGTCAAGGACCAATTGTGAAATTAATTTCAACTGAACGAAAAAAAAAATCAATAAAATCAATCAAGCAGTTATCTATTAAGATGTGGATAAACAGATCTAAGAAATTGCAATTTGATAAAAAACTGAATCAAAAACAAAAAGTTATGTTACTATGTGACTACAAAGAGGTTGATAAATATATTTTTTGAATTTGTATATTGTTTTTTTCCCTATTATTTACTGCTCTATTATCATTTTCCCAATTACCTTTTTTTGAAAGAAATTAATTTCTTTATTCAGCAAGAATGCATTAAATTGACAAACAGTAAATACATTTATAATGTTACAAAATATTTCTATTTCAAATAAATGCTTATAACTCATAACAACTAAAATTCTTATAACTTTCTATTCATCAAAAAAAATTCTGAAAAAAAATGCATCACGGTTTTTGATAAAAAAAAAAAAATCAGCATATTAGAATCATTTTTGAAGGACCATATGACAATGAAGACTGTAATAATGATGCTTAAAATTCTGCTTTGCCATCACAAGAATAAATTACATTTTCAAATATATTCAAATAGAAAACAGCTATTTTAGATTGGAATAATATTTCATAATATTACTGTTTTTACTGTATTTTTGATCAAATAAATGCAGCCTTGGTGAATATAAGAGATTCCAAACCGACCTCAAACTTTTGAATGACAGTGTACAATGCAAAAATTCCAAAAGCAGGAATTATGTTAAACATTTTCGTATATTAAATAATTAAAGTAAAAATTAATATAAGATTAATAAATAGTGCTTGAGCAAAAATTTGAGCTTCATATTCCTGTTTTTAAACCCATAGAATCAATTAAAAGTGTATTAGTGTAAACTCTGGTGCTATGTTGATAATGTGTAATAAAAAAATTTGTATTTGATTAAAAAGCATTTTCACTATAGTCTCTAAAACTTTTGGACACCGCTTTATATTTAGCACCAGTATATGTGTTGATAGGGGTCATCTCACTGTGCAGTGGCCAGTTCAACCCTCACAAGACATCTGCTGCTGCTGGCAGGGACCAGTGGACAGAAACAGGGCACATCTGTGCAGACTTACACCGCCAGCACTGGGGGACGAGGTCACAGGGGAGCACGTGTTTATGAAACATTTGCTGCTTAAAAGCTGTGAGCTACGGGCAACACGAGGACTTCAGAAGAGATTTACAGCATGGCCTTTAATGGCTCATATGGGTGGACTCTTGGTTCAGATGGTGGTCTGGGCTCCTGGCGCTTTTTTCTGGGTCGACTTGTGGATTTTCACACATTCCACTCCAACACCTCCCATCCACCAGTCGGTCTGCGCTGGCACAGGGCAGCTGGCGTGAAAACGTCACCCTCACATCCCATCAGCTGCCACACAGAGTTCTCCATTCCAGTTCTGATCATAATAGCATTCATCACTCCGAGCATAATAGCGCTCATCTCTATGAAACTTTCTAAGAACAGCCCCACTGGTAAACGTACAACCATGTGGCTGACCAGCCAAAGCAATAAGAGGTTTATATTATCAGTCGACGTGCAAGATGAATCCAGAAGCAACGTCCGTGTGGCTGGGCCTGCACGGGTCAGAGATTATGGCAGTAAATACAGTAGAAGTATTAACCACAGCACTTGGGCTGTTTGTCAAGGTGATGACCCCACGCATACAGGAACATATACCAAACAATAAAATGTTGGACAAAGTCGAGCTGCAATTGACTATCTAGGTCTGTTAGTCCAACTTGATGCAATTGCAGATGGACTAAAGCATTTACATGACATTTAAAAAAAAGATAAATTATTGTTTTAGTCTGACTGAAATCAAACTTTTAAAAAGCGTATATAAACACACTTTTGGTCTTGCTGTGTGTCGTCAATTGTCATTGCGTGCCTTGTCGTATATTGTGCTGTTGGTCTGACAGAGATGCGGTCTGCCATCGTACATTTGCAGAACTGTCAATCACAAAATCATGACACAAACCCTGATAGAAAATGGTACACGTTATTCAAAACAACATGCAATATACACTCGCATCAAAGTCACTGAGTGAAACAATGAGAAATCTTGAACATCTAATCACAAATCTTTTAATTTTGTTCATTTTTACTACATATTTTTGTCTCAATTACTGCAAATCTCAACTATCAGGCTCCTTGAAGATTGAAATGATCGTTAATGCTAGATATTTTGGCATTTTAACTGCCAATTCCTTTAAAACCAGTCAATGCAAAGCACAATCTGCGTTTCTCAAGTTTAATTTTAAAGATCTATCAGAGCCATATTAAAGGCTGCGGGGTGCATAAAAAAGGAGGAACAATAGTTATGAAGACAAACATTACAGGTGTCTACAAAATGTCTGAATGCTGAGTATGATCTTTGGTTCCCCTGCTTTAGTTTCATACTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_02840202_02843749.mRNA True 3163 mRNA 0.38 4 2839482 2845691

Neighbor

gene id symbol gene type direction distance location
CI01000027_02742168_02773304 NA coding downstream 66178 2742168 ~ 2773304 (-)
CI01000027_02460101_02470648 DPYS coding downstream 368677 2459265 ~ 2470805 (-)
CI01000027_02314898_02317288 NA coding downstream 522174 2314551 ~ 2317308 (-)
CI01000027_02240021_02241453 NA coding downstream 598029 2239996 ~ 2241453 (-)
CI01000027_02226447_02227499 NA coding downstream 611983 2225781 ~ 2227499 (-)
CI01000027_02950348_02954214 SQLE, SQLEA coding upstream 104415 2950106 ~ 2954214 (-)
CI01000027_02961909_02972343 RNF144B coding upstream 116073 2961764 ~ 2972343 (-)
CI01000027_02984235_02987159 CCDC127, CCDC127A coding upstream 138316 2984007 ~ 2987159 (-)
CI01000027_02989304_02990854 NA coding upstream 143598 2989289 ~ 2990854 (-)
CI01000027_03035114_03099542 ADAM22 coding upstream 189423 3035114 ~ 3099542 (-)
G139743 NA non-coding downstream 101411 2737348 ~ 2738071 (-)
G139839 NA non-coding downstream 105165 2733645 ~ 2734317 (-)
G139807 NA non-coding downstream 144045 2695226 ~ 2695437 (-)
G139806 NA non-coding downstream 144296 2694912 ~ 2695186 (-)
G139805 NA non-coding downstream 145058 2694215 ~ 2694424 (-)
G139929 NA non-coding upstream 83617 2929308 ~ 2929766 (-)
G139883 NA non-coding upstream 101640 2947331 ~ 2947916 (-)
G139939 NA non-coding upstream 266577 3112268 ~ 3114186 (-)
CI01000027_03117518_03132307 RUNDC3B non-coding upstream 270683 3115633 ~ 3132307 (-)
G139972 NA non-coding upstream 292116 3137807 ~ 3138013 (-)
CI01000027_02119227_02124423 NA other downstream 713454 2119131 ~ 2125142 (-)
CI01000027_01303308_01319462 NR2F5, NR2F1, NR2F1.L, NR2F2 other downstream 1519321 1302034 ~ 1321178 (-)
CI01000027_01241417_01245177 NA other downstream 1592505 1240478 ~ 1246267 (-)
G139117 NA other downstream 2601903 234212 ~ 237579 (-)
G140118 NA other upstream 655843 3509352 ~ 3584679 (-)
CI01000027_03787377_03788902 NA other upstream 941687 3787377 ~ 3790279 (-)
CI01000027_03922380_03931033 NA other upstream 1076705 3922242 ~ 3931033 (-)
G141481 NA other upstream 1526556 4372247 ~ 4412810 (-)
G141488 NA other upstream 1661784 4507475 ~ 4508971 (-)

Expression


Co-expression Network