CI01000027_02194222_02218628 (ARHGAP30, ARHGAP33)


Basic Information

Item Value
gene id CI01000027_02194222_02218628
gene name ARHGAP30, ARHGAP33
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 2194222 ~ 2219765 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_02194222_02218628.mRNA
TGTGAAAGGTCACTTCCCCAAGCTTGTTGACTGTGCCCACTTTCACTATGAAAATGTGGACTTCGGTTCTATCGAGCTTCAGTTTGCCAACGAGCAGAGCGATGCCAGCTGGACCTCGGGCAGTGCCAAAGACCTGGTTTTCCTTGTGCAGGTGTCCTGCCAGCTCTTGGTCCTGCCCGCCCTCTGTGAGATCGGAGATCGGGCGGAGATCTTCACACCACTGTTGTCGGAGTATCTGAACCGTCTCTCCATGATTGTGGACAATAAGCTGAACTGTGGGCCGGTTCTCTCCTGGATGGAGATTGACAACCATGGCAACAGGTTCCTGCTGAAAGAAGAAGCCTCTTTAAACGTCCCCGCCATCGCTGCTGCTCACGTCATCAAGCGCTACACTGCCCAGGCTAGCGATGAGATCTCCATTGAGGTTGGTGATATTTTGTCAGTGATTGACATGCCGCCCAAAGATGACACCACGTGGTGGAGAGGAAAGCATGGATTCCAGGTTGGCTTCTTTCCCAGTGAATGTGTGGAATTAATCAATGAGAAGTTGCAGCAGTCGGTCAGTGCTCCTGTCAGTAAGCAAGTTCTTCATCCTTGGTTCCTAAGCCTGGCTGTGTCCAAGAAACATGGCAAGCTGATGGGCTTTCTGCGCACCTTCATGAAGTCCAGACCCACCAAACAAAAGCTGAAGCAGAGGGGAATCCTGAAAGAACGAGTGTTCGGCTGCGACCTCGGCGAGCATCTCCTCAACTCTGGTCAAGACGTGCCGCAGGTCCTAAAGAGCTGCTCAGAGTTCATAGAGAAGCATGGTGTGGTGGATGGCATCTACAGACATTCTGGCGTGTCCTCCAACATACAGAAACTCAGGCATGAGTTTGACAGTGAAAATGTTCCGGACCTGACGAAAGACGTGTACATGCAGGATATTCACTGCGTTGGCTCGCTGTGCAAACTCTACTTCAGAGAGCTGCCCAATCCTCTGCTCACGTACCAACTCTACGACAAGTTTGCTGAATGTATGGGAGAGATGACAGATGAAGAGAGAATGATGAAAGTACATGATGTTATCCAGCAACTTCCACCTCCTCACTACCGCACTTTGGAGTACCTCATCAGACACCTGGCCCGTTTGGCCACCTGCAGTGGAGAGACTAACATGCACATTAAGAATCTGGCCATCGTCTGGGCCCCCAACCTGCTCAGGTCCAAAGAAATTGAGGCAGCAGGTTTAAGCGGTGCTGATCCATTTAAAGAAGTGCGCATTCAGTCCGTGGTCGTGGAGTTTCTTCTCAGCAATGTGGAAGTTCTGTTCAGTGACTCTTTCACTTCTGTTGGACGCTTCAATGCAGTAAGACAGCAAGATATTTGTACATGGATGTCCACTAAAAAGAAACAGAATATGTCCTCAGCTTGGAATATGGTATCTGGATTGTTGCTGGTTCAAGGTGGTCTACCAGCACGACAGTCTCTGACCAGGCCCAAGTCGTTTGTGTCCACCAGGCTTCTGTCTCTGGAGGAGGCACAGGCTCGCACACAAGCTCCTCTTCTCCTTCAGGGATCTCCTCACCATGCTATCGGCCAGTTTCACACTGTACTGGACCTGCCTGCCGACAAGAGGAAAAGAGGGATGAAGGTCCGGAAGTCAGCAGGCGGGAGCTGGAAGACGTTTTTTGCCATTGGAAAACCTGGAGCTGCAGGTCGACGTAAACCTACCAGGATCACCTCTCTGTTCCAGCCCACTACTTCTCATGCAGGTTGCAGGGTGGACAGTGTGACTCTCAGGTCAGCAAAGAGTGAGGAGTCCCTGTCCTCTCAGCACAGTGGAGCAGGTCAGGGGAAGATGCAACGCTTACGAAGACCTCGCTCCAGCAGTGATGGTCTGTCTCTGGCTGCTTCTGTTGATCCGCAGCTCCTTCCCCAGCACTCCCCATCTAGAATCCATCCGAGCCGCTCTTACGACAGCTTGCTGCCTGAGGAAATGCGTGATGCTGATGAGGAAAATGAAGATGAAGAGGATGAGGAGGGTGTGTACATGTTGCCTGATTTCTCCCAGGAACTACCCACCTCATGGATGGCAGAAGATGTCATTGACTTTAGCCCCACCTTCCTGGAAGATGGGCCAATAGGGTTAGGGAGCACGGCTGTCGCTCCTAGCGGCAGGGAGTCCCCTCCTGCATCTGCACCCCCTCCGTACCGTTGTCTGAGCCATCAAGGCCATACCCGCTCTGGTAGCCAGCGCTCAATCACAGAAGATCCAGACTCAGTTCTCAACCAATCAGAGGCTGCAGCCCGTCGGAGTTTGATCCTGGCTGCAGCAGCTCCGCCTCAGCAAGTGTTCTGTCAACACAGGCCGTCTGCAGTCACTAATGCTCCCTCAAGCACAGCCCAGCAGGGCGAGTCAAACCTAAGCCCATCCCATAGCCAGACGCCAGCTCCAGCGGCCTCTGCACCCCCTACTCAGCCCCCTCAGGAGAGGCGTTCCTTTACACGTAAAATGGTTCATGCACTTTCACCTAAAGCGCCCAAATCCCCCCCTCTGGACATCTCAGATCCAATCTCCATCAGTGTACCTGCTAAGGTTCTGGAAATGATTGGTGGACGAGCTGGTGAATTGCAACCTGGACTTCCAAGCAGTGGACCGTCTCAGCCACCCCAGATGATATCTATGCTCCTGAGGTCGTGTGACTTTCAGCTCACTGAGAGCTGCCAGCAAGAGCTCAACAGTAAGTTGGGCCCCATCGCCAAGATCAAGGGTCCTAGTATCTTGGGTCCCACTGGTGTTCCTCTTCCATCACAGCAGCCCCCTCCTCCTCCCCCCAAGAACCCTGCACGCCTTATGGCTCTGGCTCTGGCTGAAAGTGCCAACAAGGCACTTCGGCAAGGTGCCTCTCCCCCATACCGCCCCCGTCAGAGTGGAACCTCCTCTGAGACAGACGTCCGCTTCCAGAGGTCCCTCTCTGCTGATGCAGGAGCTCTGCTGTCTTCTGATCCTAATCAGATCTACTCCACTGTGCGCCCCTTCTCAGTCTCTGATTCTGGGACATCTAATTCTGAGTTGTCAGCTGCCAGTTCCTCCGAGGACAATGAGCGAACCCCAAGCCCCATTTACAAGAACGAAGAGCCAACTTCTCCAGCGCAGCCCTTAAAATCCAGCCCACCCTCCTCCAGCGAAGCCATCCCTTCCCAGAGAAAACCCCCAGCGTATGGACGGCAATTTTCTGCACCACAGCTTCAGCAGGAGAAATCCAGTGGCCACTCCAAGCCTGCAGCCCAGCCACACACTCAGCTCCTGCACTCCAAGTCAGAGAGCTCTCCACTGGCCCAGGTACGAGCCTTCCAGCCCACCCGCCCTAAAGTGCCACCCAAGCCCCCTGATCTTGCTCCCTTAAGGGCTCCACTCTCTCAGACTGACCGGCATGATCACATGCGTCGCTCCTTGGATGCCAGTCGTATTCGACGATTGGCAGGACCTCCACAAGGGAACACACCACTTTCCAGAGCTTTCTCTGAGCGCATCAGCAGTACCTGTGACATGCTGTCTCGCTATCATGCAGCCAGAATGGCCAGCCAAGCTGCCCAGGTTGCACACCTTCCCCAACAAAAGCAGCAACAGACTCAGTCCACTCAGATCAGAACGGTTGTCCCCTCCGAAGACCCATCCAAGATGGAGAACTTCTACTATGAGATTGGTGCACCTGAGCATCCACAAGTGCCACCCAGCTATGCACGCCACAGCTATCAGAATATGAAGCTGGATCTGGAGGGAAACCTCCGTCTCACTGACCCAGCCAATCAAAGACCTATTTCCAGGGGTTACCCTCCTCCCTACAACCCCCAAGGACCTGTGGGCAGTAGGGCTCCCCAGCTGTGGTCATCTGAGGCCACACGAGCTTGGGCCGCAGCACATTCTCACTCTTTCTCCTTTTCCCATTCTCATTCTCACCATCGCTCCCAGGATGGATCATCAGGAAATCCTTCCCACCCTCGTCCTCAGCGACAGACATCATCATCTGTCAGGTTGTCCCGCAGTGAAGTGCATCCCTTACCCGCGTCCGCTGGAATGGGCTCCTCTGCGGGCATGATGCCTCTATCCGTTCACCCACGTAACTTGCATCGGCCCCAGCGTTCGCCTTCTGCAGACCACACCGCCTCCCAGCTTCACCCCTACTTTGAAAATGGGAAGGTGTGTTACCGGTACTTTGAGGCTTCCAAGCCGGAAGACTTACCACTGAATCAGCATCAGCATTCTGTATTGAAACCACCTCAGGCTTCCCCGGTGCAAGGAATCACAAAAGATCAATCTGAGCCCATCTACGTCAACTATCCTTTCACAAACCAACCAGGATCTGGGGTTAATTCAAAGGGCTGGGCCACCACAAACCTTGATGAAAATGATCATCAAGCATCTGAGACACTGGAACCACCTTCTAAGTCTCAACCGGATGACAAGCAGAAACTTTCAGAGCATGAAAGTCCCACAGCTAGCTTCGACAACCCTGCCCAGAACGATGTATCCTCAGATTCCAAAGAGATCAATATAGCAGCGTCGGCCTCCACTGCCATGCATTTCCGCAGCCGCTCAGATCCCCAAACTACCAGCTCAGAGCCTGTTCATGTCCTAACTGGGAAGGAAATTGCCTCCTTGCTAATTGAAAAGCTTGCAGAGGATGAAATTGAGGGTCCTTCAGTGCCATCTTCTTCGTCCTCTTCTCCGCACATCGAGCACCCTCCAAATCCCTACGCTAACCAGCAGCAGCAACCACCACCTGCATACAATGTCTACACTCCAGGACCCTCTCGAGGGCGCTTTGAAGGTCAAGTCCCACCTAGAGAGGGATCTGGACCTTTCCAACGTCAAGACCCCTTGCGGAGATCTTCTGGAGGCCAGTATAGACAAGCTTTTGACGTCATGCCATCTGGCGACCAAGTCCTTAAGTTTTACAGAAGCCAAGACTTTGTCCCAGTCTCCCAGGGAGAAAGCACAACCCCTAATCCTTATCCCCCAAGACCATATTATCAGGACCCCCCATACCCCAATTGGGGCCCTCAAGGCCTCCCAGAAGCTTCCCACACATGCACTCCACCTACAGTGGCCTTCTCAAACTTAGCGCTTGGATCAACAAGAGGATACGGGCCCCAGACAGTGGCCAACCAATATAACCAATACCCGTACCAGACAGGGTCAGTGCTTCCCCAATATCCCAACACACCACGACGAGATGTTGTCCTGGATCCATCTCTCCGACCTCCGGGGTTGCGGAACCAGAGAGGCTTAAACCGGCAGGGAAGCCTGCCGGGACCCAATTGGACCATCCGAACTGAAGGCCAGACCCGTAGTTATTGCTAAAGAGCACAACTGCCACAAAAAGTCCTGTCTTTAGACTTAAAATGAGATAATATGACGTAGACCAGTATAAGCACTAGACTTTTATGTTTCCTGTACATGTTAACATGTTGTGAAAGAAATTGTTAACCTCCCCAAGGGGAGACAGTGTACAGAAACAAAGTTAAGTAGGGTATGTCTTTACTAGTGTTTCTGTCTCGGAAAGACCCCACTGCAGTCCTGCGATTAGAGTGCATATTGGAGTGGAAAAAGTGTACGAGAATAAGACATAAAGTGGAAAGGATCAAAGAAGTGAACCATAAAGTGGCTTAGATATGAAAACATTCCAGAACACACTGTGCTGTCCAGCAGAGGGAGTCAGAGAGGTACATAGCTGCTATACAGGACATTGCTCAGTGGCTATATTTTGTTTTTCTGCTTTCGGTTTTGTCCGGTTTAAGGTTCTTTTTGACACTAGATCATTCTGTGCAGGGGCACATGCTTAATATGTGTTTCTTTCTCCTCAAAGTACGATAAAAATAACCTCAAGAGATACTAGTGGTTTTATGAAACTTTATGAAGATGGTTCGTTTTTGTTATCTTAATTTTTTGGCAGCAATGTGATATTTCCTCTTTTTTTTTTTTTATTGCTTTTTTTGATGTTTCTAAGTTATTGTAAGTTTTCATTGGAAAAAAGTTATTGTGAAAGTTTTATTTTGCCTTTCTTGAATTTATTTCAAAGAATGTAAAGTTTAGGACTTTGTGACCTTTTTGTTGTTTTAATTTCTTTACAGTCTGTGTGAATTTGAATGAGTGTGTCTTGCCCAGAGTGTCTGATGTTAAGCACATAAAAAGGAACGCTAATTGCTGATGTCTTTGGGGAGGGTGCGTAATTTAGAGTGCATATTTCTTTGAGGTACTGTTTTCTGCTCATTCTCAAGTAATGTGTCAGATGATTTTGTATCAATATTGGTGTTCTAATCCAAAGCAAGTATTTCAGGTAGGTCACGTTCACCCTGTGTCACTCCCAGACATCCCTGGGTTTCTGTGTGAAGGAGGAATCCCAACCTAGCAACATCGAATAACTGGTACTATTCACCACGAAACACTAAAAATCCCTTCAATGCCCACACAACACTAGTCTTAGAAGACTTTATAAAA

Function

symbol description
arhgap33 Predicted to enable GTPase activator activity. Predicted to be involved in small GTPase mediated signal transduction. Predicted to act upstream of or within protein transport and signal transduction. Orthologous to human ARHGAP33 (Rho GTPase activating protein 33).
arhgap30 Predicted to enable GTPase activator activity. Predicted to be involved in small GTPase mediated signal transduction. Located in intracellular membrane-bounded organelle.

GO:

id name namespace
GO:0035091 phosphatidylinositol binding molecular_function

KEGG:

id description
K20647 ARHGAP32; Rho GTPase-activating protein 32

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_02194222_02218628.mRNA True 6484 mRNA 0.51 22 2194222 2219765

Neighbor

gene id symbol gene type direction distance location
CI01000027_02156853_02161914 RBM42 coding upstream 32218 2156853 ~ 2162004 (+)
CI01000027_02125080_02146147 NA coding upstream 47720 2124834 ~ 2146502 (+)
CI01000027_02106256_02118045 NA coding upstream 75724 2106185 ~ 2118498 (+)
CI01000027_02083444_02085743 NA coding upstream 108442 2083143 ~ 2085780 (+)
CI01000027_02059709_02072254 GAPDHS, G3PT, GAPDH coding upstream 121817 2059377 ~ 2072405 (+)
CI01000027_02230213_02233471 NA coding downstream 10448 2230213 ~ 2233491 (+)
CI01000027_02234729_02237937 NA coding downstream 14964 2234729 ~ 2238114 (+)
CI01000027_02242334_02250969 DCAF13 coding downstream 22569 2242334 ~ 2251188 (+)
CI01000027_02254195_02308930 NA coding downstream 34138 2253903 ~ 2310086 (+)
CI01000027_02337884_02402668 RIMS2 coding downstream 118119 2337884 ~ 2402668 (+)
G138656 NA non-coding upstream 39140 2154569 ~ 2155082 (+)
G138649 NA non-coding upstream 40481 2149329 ~ 2153741 (+)
G138693 NA non-coding upstream 74429 2119198 ~ 2119793 (+)
G138672 NA non-coding upstream 112170 2077080 ~ 2082052 (+)
G138686 NA non-coding upstream 141287 2052580 ~ 2052935 (+)
G138669 NA non-coding downstream 51604 2271369 ~ 2324059 (+)
G138675 NA non-coding downstream 107127 2326892 ~ 2329110 (+)
G138683 NA non-coding downstream 112224 2331989 ~ 2335650 (+)
G138651 NA non-coding downstream 121439 2341204 ~ 2345765 (+)
G138515 NA other upstream 517362 1664408 ~ 1676860 (+)
G138436 NA other upstream 686406 1506961 ~ 1507816 (+)
G138290 NA other upstream 1195041 995970 ~ 999181 (+)
G138247 NA other upstream 1324647 855388 ~ 893121 (+)
G138238 NA other upstream 1362539 829774 ~ 831683 (+)
G138915 NA other downstream 1264622 3484387 ~ 3486647 (+)
G138953 NA other downstream 1282307 3502072 ~ 3520065 (+)
G140436 NA other downstream 2517633 4737398 ~ 4774262 (+)
G140440 NA other downstream 2560652 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 2829158 5050310 ~ 5055755 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location