CI01000027_03421902_03436988


Basic Information

Item Value
gene id CI01000027_03421902_03436988
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 3421828 ~ 3437216 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_03421902_03436988.mRNA
ACATAAATGACAAAGTAATGAAGTAAATTATTCAAGTACTTTATATCCCTGCTGGAGTGACATATCTGGAAAACATGAACTGTGGGAGGGAGGAAGGGGCGACGGACAAGTTCAGCAGAAAGAAAAGAAAGCAAGTCAAAGGAGCAGAGAAATGCAGCCGCTCTAATCTCAAGTCTGGCTCCACAAACAGTTTGGGTGAGAAGCTCCAGAGGTCGAGGACCCCTGCAACAGTGCAAAATATACCTCAGGCCAGATATAGCGCTACTGTTCTGGAAGAAAGAGAGCATCAGATAGATGGTCAGAATATGATCCCTAACCCTGCTCTCATACTCGGACTATGTGCTTCTTCGGCCCTGCTGCGCTGGGTGGTCTGGATTTCTGGTCCTGTGGTCAGCATTGACAGTGTCCATATAGTGGCATGCAGCGATCAGCATCGGCCCTGCTGGGATAAGAATGGCAGCGCCGTGGATAGCTTGCTCTCATTCAGCCAGTCTGTGGACAGATCCTCAGCCTGCAGACAAAACATTGTCACCCATCACAATGCAGCGGCCATGTCTCTGCGGCAGACCGGTGGCTCGGTTCTTCGTTGGCTTGGCTTGAAAACCCCCAGCTCCGCTGACAGCTCCTCCTTTTGTCCATCACTCAGACCGCCGCAAGCCACCCCTGCAAGCAGGCCAAAGCGCAAACAAGAGGACAAAAAGAGAAAGGATGACACAGATATAAAAGCCCTCCCCCTGGCTTCCTCTAATCCAATTAGAGGGCTGTAAATTTGATTGGAGCCCTGAGAGTGTGCCTTCAGCTGTCCGTCATTAGCGAGTGGTGAGAGGGGGTTCATACCTCATAGCAGAGGTAAAGACTGAGATCAGAGTACAAGGAGACACGTATGTGAAAATGGAACTGCAAAGGACATGTTTGGATATTGTAAACCGTAAGAAAATAATATGTAGAAAAACAGAAAAGATGCCAGGACATTATGAAAAGTTGAATGAAAATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_03421902_03436988.mRNA True 995 mRNA 0.48 4 3421828 3437216

Neighbor

gene id symbol gene type direction distance location
CI01000027_03335011_03357910 SLC4A7 coding upstream 63551 3335011 ~ 3358277 (+)
CI01000027_03278134_03279807 ANKRD34A coding upstream 140806 3278134 ~ 3281022 (+)
CI01000027_03243374_03247133 TXNIP, TXNIPB coding upstream 174658 3243154 ~ 3247170 (+)
CI01000027_03233523_03240000 HFE2 coding upstream 181826 3233523 ~ 3240002 (+)
CI01000027_03212432_03231800 THBS3, THBS3A coding upstream 189966 3212432 ~ 3231862 (+)
CI01000027_03470743_03477848 TBX20 coding downstream 33404 3470620 ~ 3479641 (+)
CI01000027_03524553_03546701 SMARCC1, SMARCC1A coding downstream 86391 3523607 ~ 3546701 (+)
CI01000027_03570192_03600805 CSPG5A coding downstream 132976 3570192 ~ 3600805 (+)
CI01000027_03610825_03621755 PPOX coding downstream 173527 3610743 ~ 3621892 (+)
CI01000027_03660816_03671233 KCNJ9, KCNJ6, KCNJ5 coding downstream 223600 3660816 ~ 3671515 (+)
G138926 NA non-coding upstream 3138 3418423 ~ 3418690 (+)
G138925 NA non-coding upstream 3880 3417684 ~ 3417948 (+)
G138904 NA non-coding upstream 101297 3319283 ~ 3320531 (+)
G138884 NA non-coding upstream 106996 3309830 ~ 3314832 (+)
G138892 NA non-coding upstream 166621 3254930 ~ 3255207 (+)
G138959 NA non-coding downstream 10763 3447979 ~ 3503193 (+)
G138915 NA non-coding downstream 47171 3484387 ~ 3486647 (+)
G138918 NA non-coding downstream 55216 3492432 ~ 3497919 (+)
G138954 NA non-coding downstream 70306 3507522 ~ 3514673 (+)
G138515 NA other upstream 1744968 1664408 ~ 1676860 (+)
G138436 NA other upstream 1914012 1506961 ~ 1507816 (+)
G138290 NA other upstream 2422647 995970 ~ 999181 (+)
G138247 NA other upstream 2552253 855388 ~ 893121 (+)
G138238 NA other upstream 2590145 829774 ~ 831683 (+)
G138953 NA other downstream 64856 3502072 ~ 3520065 (+)
G140436 NA other downstream 1300182 4737398 ~ 4774262 (+)
G140440 NA other downstream 1343201 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 1611707 5050310 ~ 5055755 (+)

Expression


Co-expression Network