CI01000027_05074328_05075547


Basic Information

Item Value
gene id CI01000027_05074328_05075547
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 5074328 ~ 5075740 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_05074328_05075547.mRNA
GAATCTCACCAGCACAAGGTAAAATGAAGCTGACATTTGCTCTCATCCTTGCACTCCAAGTGTCGGTGTGTGTCTGGGCGACACACGAGCCTGACAAGGAGTTAGTTGAGAAATATACTGCGCTGAAGGAAGTTTTCCTTAAGAGGCTTGTCACTGCTTATGAAAAGGCCAAAGACACTGTTCAGCCACTGCTAGAGGGCTCACCAACAGGAGAAAAAGCCAAGGAGATTTTTGAAGAAATGAGGCAAAGCCCAAGAGTGGAAAGCGCTGTCAAAATTATCAGCGGTCTGGCCAGTGAGCTCGAGCCTGTCGTGGACAAAGCTCGCTTGGCTCTTCTCGGTGCTTATGGCCATTATCTCCGGCCTTACATTGGCGAACACCTGGACACAGCAATCACCAACGTCAAGCCAGTGCTGGATACCGTCCTGCCTCATGATGGTTAGAGTCCACTGCTCGTCAACCACTGACTACTTCAACCCAGCAAACATGCATTTTCATTGCTTCAATAATGGATCCAAATCTGAAACTATCTGACAGCTGTGTGTCCGGCACAGTCATCATGTCAGTACAGTCTTCTTTTGCATGTATATACTGTATCTGTGTATTTGATACTGTTCTGTTTAGTGCAGGAAAAAA

Function

NR:

description
14kDa apolipoprotein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_05074328_05075547.mRNA True 636 mRNA 0.47 4 5074328 5075740

Neighbor

gene id symbol gene type direction distance location
CI01000027_05071693_05072917 NA coding upstream 1216 5071693 ~ 5073136 (+)
CI01000027_05069310_05070638 NA coding upstream 3676 5067917 ~ 5070868 (+)
CI01000027_05061061_05063086 APOEB coding upstream 10914 5059739 ~ 5063414 (+)
CI01000027_05050310_05055447 NA coding upstream 18573 5050310 ~ 5055755 (+)
CI01000027_05018992_05033275 NA coding upstream 40038 5018260 ~ 5034290 (+)
CI01000027_05082223_05082843 APOC2 coding downstream 5876 5081616 ~ 5083193 (+)
CI01000027_05157946_05159188 NA coding downstream 80393 5156133 ~ 5159246 (+)
CI01000027_05205628_05209568 NA coding downstream 129347 5205087 ~ 5210170 (+)
CI01000027_05272101_05283619 NA coding downstream 194591 5270331 ~ 5283941 (+)
CI01000027_05398796_05408689 NA coding downstream 322668 5398408 ~ 5410067 (+)
G140674 NA non-coding upstream 34841 5039241 ~ 5039487 (+)
G140672 NA non-coding upstream 35530 5038545 ~ 5038798 (+)
G140437 NA non-coding upstream 82781 4975727 ~ 4991547 (+)
CI01000027_04978217_04987503 NA non-coding upstream 87405 4978217 ~ 4987503 (+)
G140645 NA non-coding upstream 188510 4885619 ~ 4885818 (+)
G140683 NA non-coding downstream 26651 5102391 ~ 5108232 (+)
G140685 NA non-coding downstream 34079 5109819 ~ 5114502 (+)
G140684 NA non-coding downstream 42728 5118468 ~ 5164862 (+)
G140680 NA non-coding downstream 121886 5197626 ~ 5201086 (+)
G140734 NA non-coding downstream 127456 5203196 ~ 5203505 (+)
G140440 NA other upstream 288668 4780417 ~ 4785660 (+)
G140436 NA other upstream 294990 4737398 ~ 4774262 (+)
G140862 NA other downstream 636872 5712612 ~ 5712702 (+)
CI01000027_05757143_05758496 NA other downstream 681242 5756982 ~ 5758881 (+)
G140924 NA other downstream 887466 5963206 ~ 5965326 (+)
G141052 NA other downstream 1195627 6271367 ~ 6271600 (+)
CI01000027_06706050_06708485 NA other downstream 1630637 6705983 ~ 6708513 (+)

Expression


Co-expression Network