CI01000027_05205628_05209568


Basic Information

Item Value
gene id CI01000027_05205628_05209568
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 5205087 ~ 5210170 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_05205628_05209568.mRNA
ACATAAAAGGGTGGGCTTGAATACAGTGGGAGGGCTTGAATACTTTCCTCACCTTAAGACTGTTTTGTGAAGGTCAATAGGAATCTTGTGTATTAGTACAGTCTGTTTTTTTTTTTTCTTTTCTTTTTTCCCTTAAAGAAAAGCAATGATGCAGCCTTATTGAACCGTGGAAGAAATCTATCATTTCATACCCTGCTGAGAACTGAATTAGTTCATGTGCATCGACACCTAAACTCCCAAGCAGATAAGCCTTTCCTCTCCCCTTCATTCTTCTTTCAACCCAATCATTCCTGCCATATCTGTTTACTTTAGAGATAGAGCCCTGGCGTGCGCAAATCGGTGATGGTGTGTGTCAGTCCCAGACTGTGCATTTCTAAGTGTGTATATGTGAGCTGGGGTCTTTATGTGTTCCTGAATGAGATTGATGTTTATTTATGGTGGCGATGCTGCCCTTTGTACTAGCCAAATGGAATGGGCAGTTCTCCTCACACACTTGAATGGATTGATAAGCCTGCGCACACTGTATTGAGTTGTGGTAAAAATGGTTTATGGTTATGTGTTCACTCTGTCCATCAGCACATTTCAAAAGCACGGAGCGTGGATCATGTATACTATATGGCTATATTCCCTGATTCAGTGTATAATAGCAGTGCTGGTGATGGGAGTGAGTATGAGGGTGTGTTTGGCTGCTGGTTCTGCTGCAGCTGGGGCAGGAACTAGAAACTGGAGCACATCTGCATGCCTGAAACTTTGCCTCGGTTTGGTTGGGTCAGTGGGCAGTATTGTGGTCGCTTCTGTGTCTGTGGTATTAAACCTGAGGAGTTCCCAGTGCCTGTACACCTGTATCGCCATGGTCTCCTGCCCCCTACTGGTCAGGCAGTTCACTATGTGCCTTCTGCTTCTACTCACCCTTAACACACACCTGCAGTGCCGCCTGGGGAACAGATATGCAGGCTTAGTGACTCGCAGGCGGGTTTTGTGCTTGGTGCTTCTCTGCTGGGTCATTTCAGTGATCACCGCCTTCGGCCAGTTCATCATTTCCAACTCTTCTGATACTTGGGGAATTCCTGAGGACGACGATACAGCTGGACTCGGGATGGATGAATGGCCTGAAGTAAATTACACCACCCCTGCCCTCCCTCCCAAACGGCCCTACCCCCAGGATCGCTCTGTAATCGGCCAGTTCTTGCCTTATGGAGGTTTTCTATCCAAATTTCTGGTGGAGGACAAGGAGAACTTCACGTATGCAGAGATCCACGGCAGCCACTGGGGTGTCTGTGCCTCCGACACCATGCTCAGTCCGGTTTTCCTTGTGTATGTTTATGCTATCACCGTGTTTGTTGTTCCTCTGTTGGTTCTGTTGGCCGTGTATCTGGATTTGATGTGCTTCATGCCACAGCAGGTTCCTGCGAGCTCCACATTTTCTCAGAAACAAAGCTCAGTGTGGTCTCGCTCCTTGGCTCTCTCTGTTTCTCTCCTGGTAATGCTTTGCCTGCCCCTGCACATCAACCACGCTTTGTTACTCTTCACCCCGAGTGCCACTAGACCCAGCTGGACCACTCTGACAGCCTCTGTTCTTTTCCAGATGTATAGCGTAGTGCCCCCACTCCTCTTCACCAACACCTCTCAGCAGCTAGGCATGGAGTGCTCCTTGTTATCCGTGCCCAACCTGACCTCAAGGGTTATCACCTCTCGAGTCAAATCTGTGGGGAGTGATTTCCATTCAGTGGAAGATTACCGTCACCCTGGACCGACACAGAAAGGCAAAGGACCTCCAGGGATGTGATGTCATATGAAGAGGGCACTTACACCGAAAGTTATCTGTAGAGTCCTTGCATGGGTAATGTGTAATTATATTCAGCAGTTGAGTAAAACTAATCCAATATTAGCTAATGCCAGGCTTTATTTGTATTAGGGTCGGTCAATGTAATTTCAGATGGAATTAAGAAGTGTATTACTGCTCAACTATTTTGTTCATACTTTGTGTTATTTGAGACCTAAAACATAAGTATTTATGGAATTTTCATATTTTTTTGGCCCCCTTAAATTATTGTAGACCTACATGCCACATTTCTCCTAGTAGTCATTAGTTACATTTAAATGGGCACATTTTTCTGTTCGCAATGAATTCATTCCGGTTAATGATTCCAAACTCTATTGTTATTCGTATCTGCTATTTGAAACTTCAGGATAGATAGTGAGATCTACATATTCTGTGTCTTATACTGTGACAAATAGATTTAAACCATCAGTTTTGTACACCACAAATGTAAACTGCATCTTTGCACCTCTTTGTTTCCTTCAGAAAAACAAGCCTCTTCTGTGAGACAGATTCTCAAGCACATTAACATAATGCTGACATTTAATCACATAAATGACATTTTGAAA

Function

NR:

description
PREDICTED: adenosine receptor A1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_05205628_05209568.mRNA True 2388 mRNA 0.45 3 5205087 5210170

Neighbor

gene id symbol gene type direction distance location
CI01000027_05157946_05159188 NA coding upstream 45841 5156133 ~ 5159246 (+)
CI01000027_05082223_05082843 APOC2 coding upstream 121894 5081616 ~ 5083193 (+)
CI01000027_05074328_05075547 NA coding upstream 129347 5074328 ~ 5075740 (+)
CI01000027_05071693_05072917 NA coding upstream 131975 5071693 ~ 5073136 (+)
CI01000027_05069310_05070638 NA coding upstream 134435 5067917 ~ 5070868 (+)
CI01000027_05272101_05283619 NA coding downstream 60161 5270331 ~ 5283941 (+)
CI01000027_05398796_05408689 NA coding downstream 188238 5398408 ~ 5410067 (+)
CI01000027_05444238_05445884 NA coding downstream 233713 5443883 ~ 5446211 (+)
CI01000027_05461577_05471900 YWHAZ, YWHABA, YWHAB, 143B1, YWHABL coding downstream 249423 5459593 ~ 5472892 (+)
CI01000027_05483140_05487852 NA coding downstream 272704 5482874 ~ 5488587 (+)
G140734 NA non-coding upstream 1582 5203196 ~ 5203505 (+)
G140680 NA non-coding upstream 4001 5197626 ~ 5201086 (+)
G140684 NA non-coding upstream 40225 5118468 ~ 5164862 (+)
G140685 NA non-coding upstream 90585 5109819 ~ 5114502 (+)
G140683 NA non-coding upstream 96855 5102391 ~ 5108232 (+)
G140748 NA non-coding downstream 13457 5223627 ~ 5239327 (+)
G140837 NA non-coding downstream 156864 5367034 ~ 5367304 (+)
G140838 NA non-coding downstream 157213 5367383 ~ 5367631 (+)
G140739 NA non-coding downstream 160591 5370761 ~ 5376536 (+)
G140832 NA non-coding downstream 201112 5411282 ~ 5412302 (+)
CI01000027_05050310_05055447 NA other upstream 149148 5050310 ~ 5055755 (+)
G140440 NA other upstream 419427 4780417 ~ 4785660 (+)
G140436 NA other upstream 425749 4737398 ~ 4774262 (+)
G140862 NA other downstream 502442 5712612 ~ 5712702 (+)
CI01000027_05757143_05758496 NA other downstream 546812 5756982 ~ 5758881 (+)
G140924 NA other downstream 753036 5963206 ~ 5965326 (+)
G141052 NA other downstream 1061197 6271367 ~ 6271600 (+)
CI01000027_06706050_06708485 NA other downstream 1496207 6705983 ~ 6708513 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_009903 NA non-coding NC_007127.7 CM002900.2 24198479 ~ 24207903 (+)