CI01000027_05444238_05445884


Basic Information

Item Value
gene id CI01000027_05444238_05445884
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 5443883 ~ 5446211 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_05444238_05445884.mRNA
ATATTAAAAGGATAATCTCATTCTATATTTGGGGCACACAATAGCCTATATGCAAATACTCCATTTTGTGTGTGTGTGTATATATTATATTATATTATATTATAATATAATATATTATATATATATTCTCTATACCATCATTATTGTGCCTCTTTATTTAAAATGTTTATTTCAAAACCTACTGATATTAAATATTCATTAAATATTCAGCATGAAAGAGCAGCTTGTTAGTCACAACAAGCACAGGCTTAAATGATGCTTTTAATCAAAAGTGATTCACTGCTGCTTTAATTAAAATCTGATTTTCATATACAACGTTGTCCTACTAGTAGAAAAACTATAAAATCTGATTGGAATGGATCAAGACAAGGACAAGACAAAGCAAGCTTTTTGTGCAAGATTTGTTCTTATATGCATTTGTTCTTATATGTATACATCTCCCCTAGACAAGTTCTGGTACTGCCGTCTATCACCAAACCACAAAGTGTTACACTATGGAGACATAGAGGAGTTCTCACAAGGACAAATATCACATGACTCTCTCCAGGAGAAAGTGACAGTAGCAGATATCAAAGCAGTGGTAACAGGTAAAGACTGCCCACACATGAGGGAGAAAGGAGCAGTTAAGAATAAGGAGCTGCTGGAGCTGGCTTTTTCCATTCTCCATAACTCTGATGAATATCTAAACTTCATTGCTCCAGACAAACATGAGTACTGCATTTGGACTGATGGCTTGAATGCTCTTTTGGGAAAAGAGATGACAAGTGAGCTCACAAAATCAGATATGGACACTCTGGTAACTATGGAGCTGAAACTTCGCCTCTTGGACCTTGAAAACATTCAGATTCCTGATGTTCCTCCCCCTGTTCCCAAAGAGCCCAGCACTTACGACTTTGTTTACGACTTTACCCAGCAGCACACTTGAGACTAGAATTAAGTCCTTACTCAAGCTGGTAATCAGCTGTAAGGAAGGAGTGCTCACATTTTTGCTATCCCCGTTTCCTCTCTTTCCCATTATATGGACGGAATCATGTTCAGATCATACGTTTTCCTCTAGATTGTGACTATGATGTGATGCTTTAGTTTTCTATTCCCTTTAAATGCCTTTTCATGACTTCTGCAAAGAGAAAAACTCAGTAACATTTCTTGTCATCAGTTTTAATGAACACTCGACTTGGTATCATTCACATTTATGTGCAAGTACATATCTACATAAAACACTGAGAATGGATTTGTTTCACAATCATATAAA

Function

GO:

id name namespace
GO:0016477 cell migration biological_process

KEGG:

id description
K12366 ELMO1, CED12; engulfment and cell motility protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_05444238_05445884.mRNA True 1252 mRNA 0.36 4 5443883 5446211

Neighbor

gene id symbol gene type direction distance location
CI01000027_05398796_05408689 NA coding upstream 33816 5398408 ~ 5410067 (+)
CI01000027_05272101_05283619 NA coding upstream 159942 5270331 ~ 5283941 (+)
CI01000027_05205628_05209568 NA coding upstream 233713 5205087 ~ 5210170 (+)
CI01000027_05157946_05159188 NA coding upstream 284637 5156133 ~ 5159246 (+)
CI01000027_05082223_05082843 APOC2 coding upstream 360690 5081616 ~ 5083193 (+)
CI01000027_05461577_05471900 YWHAZ, YWHABA, YWHAB, 143B1, YWHABL coding downstream 13382 5459593 ~ 5472892 (+)
CI01000027_05483140_05487852 NA coding downstream 36663 5482874 ~ 5488587 (+)
CI01000027_05489565_05492924 NA coding downstream 43354 5489565 ~ 5492969 (+)
CI01000027_05542184_05551414 NA coding downstream 95204 5541415 ~ 5553150 (+)
CI01000027_05563090_05579132 NA coding downstream 115760 5560351 ~ 5579146 (+)
G140843 NA non-coding upstream 31148 5412427 ~ 5412735 (+)
G140832 NA non-coding upstream 31581 5411282 ~ 5412302 (+)
G140739 NA non-coding upstream 67347 5370761 ~ 5376536 (+)
G140838 NA non-coding upstream 76252 5367383 ~ 5367631 (+)
G140837 NA non-coding upstream 76579 5367034 ~ 5367304 (+)
G140933 NA non-coding downstream 32751 5478962 ~ 5479215 (+)
G140929 NA non-coding downstream 120356 5566567 ~ 5567653 (+)
G140920 NA non-coding downstream 156318 5602529 ~ 5608115 (+)
CI01000027_05071693_05072917 NA other upstream 370747 5071693 ~ 5073136 (+)
CI01000027_05069310_05070638 NA other upstream 373015 5067917 ~ 5070868 (+)
CI01000027_05050310_05055447 NA other upstream 387944 5050310 ~ 5055755 (+)
G140440 NA other upstream 658223 4780417 ~ 4785660 (+)
G140436 NA other upstream 664545 4737398 ~ 4774262 (+)
G140862 NA other downstream 266401 5712612 ~ 5712702 (+)
CI01000027_05757143_05758496 NA other downstream 310771 5756982 ~ 5758881 (+)
G140924 NA other downstream 516995 5963206 ~ 5965326 (+)
G141052 NA other downstream 825156 6271367 ~ 6271600 (+)
CI01000027_06706050_06708485 NA other downstream 1260166 6705983 ~ 6708513 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location