CI01000027_05489565_05492924


Basic Information

Item Value
gene id CI01000027_05489565_05492924
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 5489565 ~ 5492969 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_05489565_05492924.mRNA
ACTGAAGTAGCTGCACAAGAGTTGGCATGGAAGTCTTACCATGTGAGGAGGTGGAGCGTGTTACTGGTTCCAAAATACATTTGCAGCAAGGAGTATTACAAAACCATCACCTCTACATTTTACAGCTTCTCGGACGACTCCAGTGATGAGGATGACTACGAAGTGCCACTGGCAGTTACAAGTGGAGAAAGCTCTATGTGCTGTGTTTGTGGAGACAGCATCCCCTTTCTGGGTAACATGATAGAGCACTTTAAGACGCACACAGCCGAGGTGCATTGTCACCTGTGTCGAGCAAAGTTTGGACGCGTAATGTCGCTGGCATTACACTTAAAAAATGCCCACCCAAAGCACAGTCTCTTGTGTGAAATCTGCGGAGCTGTCTTTAGTTGCACATGGCATCTAAACGGACATTTGGGAAAGCATCGGAAAGCTGCAATGGAGTTAAAAACTGTGGTTAAAATGGAAGAGAAAGAAGAAATTAGCATCAAAGAGACCATAAGCTGCATTGATTTGAGAAGAACAATCTTGAGAGATCATTCATACTGTATCTCAGCACAAGCAGCTACGAATGACACTTGCAGTGACATCCAGAAACGCATTGACAATGATACAAACTGCACAAATCAAGCCCCACACATCAAAACAGAAACCGAAAATTTGCCTATTATTAAAGATGAACAAATTGATACCTTCAGCTTTTCCTCATTCCCCTCGAGCCAATCAGAGCCACAGCATCTTAGCTTTGGACTCAAGGAAGAGAATGATCATGAGGATGGGCTTGGAGAAACTGTAGCTTACGTGGTGGCTGCAGAGGAGGAAATTAGGCTGGCAGAGGATGGAGAAAGTAGTGACACTGATGGCGACGCAAACCCTGATTCACTACCCCCTGGTGACACGGCGTACAACCCAGACGAGGACCTCAGCTCAGAGTCTGACGACAGTGACTCAAACTGCATCTCCAAAAGGCGTCACCAAAAGATAAAGAGAGGGAAGCGACAGACACCTAACAGGAAAAGACCTGCAAGTACAAATCTAGGGTCAATCAATATTGCAGAGAAATTTGGGTTTCAGTCTGATTCTCCCTTTTGTTGCTATGGCAAATTCGCTAATATGGAGAAACACATGGATGATTGCAGGAACAAGGTGATGTTTGCTTGTTGCCTGTGCAGTGTGGTATGTGCGAGTGAAGAATTGCTGCTGAAGCACACAATCGAAAAACACCCAGCAGCTGGGTATATCTGTGCGTACTGCCACAAAGTTTTTCCTAGACAGGAACATTTCAAAAGTCACATCTGTGGGAAAAGACCTACAGGAGAAATTAACTTGCCAGCCTCCTCTGTATCCCATTTACCCATTGTGCCTTTATCTGATAGCAGCGGTCAGGGAAGACCTTTTGCTCCTACTTCGAATGCCAATCAGAATACCATTAAAATTATCAAAATAACTCAGACAGTGAACAAAGCTTCAACGGCACCTGATCCGCCACCTGCGGTGGCCACTTTGGGATCAACCGAAGTTCTGACACTGCACCACCTGCTTCAAACAACTCCTCTTGGCACTGCTAAGGTGACCGATTTGGTTCCACAAGTTGTGGCTATGCCGCAAACTCTTGTCAGGCCCAATTTCCTTCCAAGTTCTTCTGTCGCTCGCCCGAAAGTTCCCGTCCATACACCTTCAGTAGTGCGTCCCTTGCTGTCGAATCCCGCCAGGATGACTCTTCGTATCCCTACCTCTTCCAATCCACCTCTTCTAACTCCAGTCATTGTATCCTTCTCGCCCACTGTGAACATCAATGCACCCACTCTTGTATCAGCCAACAAGCCTGTTCTGAGACAAACATCAGTGGCTAATATTAGACCTCTACCTGCAAATGTCCTGCCGGTGTCCTCAGTTACCTTTCCCACCCTGGTGAGTGCTCTTACCGGGAACAACCATCCTCAGGTTCCTCCTGCCCAGGTTCAGGCTCAGGCTCCGTTACAAATAGTGGCCATGTATGTGAACCACAGCAGGGCTTTGGCTCTTCATAAGCAATGTGAGCAGAGCTGGCGCTCCAAGACCATCTTCTCCTGCCGTCACTGCGGTGCCGTCTCGAGACAACCATCGCTAAGCGTGCGTCATCGCTACTTACACCGCGGATCAAGGTTGTACAGATGTCAGTGTGGAAGGTCGTTCCAGCAACAGCTGCATTTGCTGAGGCACCAGGTCCAGCATGCGGAGTCGGTCCGATTTGTTTGTGCACGGTGTGGAAATACGTTCGAAGGGGCGCATAAATTGACCTGGCACAAACGGAAGCATAAAAAAGGCAGGCGGTGTGCAAAAAAGAAATGCAAGGTGGCTTTTGACTGTAGCTGTGGACAGATGTTTGCAAGGCCGTCTGCGCTGTTGTGGCATATGCTTAAAAACTCGAAACTTTCGAAACGCACAAGAAAAAACTCATAATCTGTCTCTCTCTGAATAGTTTGAGTAAATGAGACACAAGTAAGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_05489565_05492924.mRNA True 2484 mRNA 0.47 2 5489565 5492969

Neighbor

gene id symbol gene type direction distance location
CI01000027_05483140_05487852 NA coding upstream 978 5482874 ~ 5488587 (+)
CI01000027_05461577_05471900 YWHAZ, YWHABA, YWHAB, 143B1, YWHABL coding upstream 16673 5459593 ~ 5472892 (+)
CI01000027_05444238_05445884 NA coding upstream 43354 5443883 ~ 5446211 (+)
CI01000027_05398796_05408689 NA coding upstream 79498 5398408 ~ 5410067 (+)
CI01000027_05272101_05283619 NA coding upstream 205624 5270331 ~ 5283941 (+)
CI01000027_05542184_05551414 NA coding downstream 48446 5541415 ~ 5553150 (+)
CI01000027_05563090_05579132 NA coding downstream 69002 5560351 ~ 5579146 (+)
CI01000027_05612215_05613339 FPR1 coding downstream 118285 5611254 ~ 5613416 (+)
CI01000027_05624635_05626386 NA coding downstream 131557 5624526 ~ 5626605 (+)
CI01000027_05654573_05657504 NA coding downstream 161604 5654573 ~ 5657504 (+)
G140933 NA non-coding upstream 10350 5478962 ~ 5479215 (+)
G140843 NA non-coding upstream 76830 5412427 ~ 5412735 (+)
G140832 NA non-coding upstream 77263 5411282 ~ 5412302 (+)
G140739 NA non-coding upstream 113029 5370761 ~ 5376536 (+)
G140838 NA non-coding upstream 121934 5367383 ~ 5367631 (+)
G140929 NA non-coding downstream 73598 5566567 ~ 5567653 (+)
G140920 NA non-coding downstream 109560 5602529 ~ 5608115 (+)
G140946 NA non-coding downstream 116904 5609873 ~ 5610178 (+)
CI01000027_05071693_05072917 NA other upstream 416429 5071693 ~ 5073136 (+)
CI01000027_05069310_05070638 NA other upstream 418697 5067917 ~ 5070868 (+)
CI01000027_05050310_05055447 NA other upstream 433626 5050310 ~ 5055755 (+)
G140440 NA other upstream 703905 4780417 ~ 4785660 (+)
G140436 NA other upstream 710227 4737398 ~ 4774262 (+)
G140862 NA other downstream 219643 5712612 ~ 5712702 (+)
CI01000027_05757143_05758496 NA other downstream 264013 5756982 ~ 5758881 (+)
G140924 NA other downstream 470237 5963206 ~ 5965326 (+)
G141052 NA other downstream 778398 6271367 ~ 6271600 (+)
CI01000027_06706050_06708485 NA other downstream 1213408 6705983 ~ 6708513 (+)

Expression


Co-expression Network