CI01000027_05654573_05657504


Basic Information

Item Value
gene id CI01000027_05654573_05657504
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 5654573 ~ 5657504 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_05654573_05657504.mRNA
ATGGCTCAAAAATGGAATGCATTCCAGCAAGCACAGATTCTTTCTAACCAGAGACCAGAAATGTCTGTGGGAACTATGGAATGTAATGGAATTCCAGAGGAACCGGAGGAGAACTTTGCACATGAGATAGAACAATTAATTGAGAAGGAGAACTTTTCAAGCATGATGGATTTGCAAGACATTGCTGAATCGGACATGAAAGACTTCGAGTCTGGTTCTCTGCAGCACACATGCTATGAGTCACCTTGGCAAGATGTAATGAATTCAGGTCACCTTGAACAAGATAAGTCAGGGGATAAAGGAGAATATAATGGTAACATGACACCCTGTCCCTTGCCTAATTCGGTAGAGGTTGAGTCCACATTGGAAGCACATTCTGACAAGGCAATATTAGAAACTGCTTTTGAGACAAATGCTAGTCTTGTGGAGTATTCAGATATTAGCAGCTGCTCTGACACGGAAGCAAATCTTGATTGCAGTTTGGGTTCATCCATTGAAGATAACATTAGTAGCAACCAGGCTGGTCTGTCTGTAGAGGAAGGAGACCAAAATTCAAGTAATACAATGGAAGTTTCTTCTGCTGAGGTCCGCCATAGTACTGTGAATTCAGATATGAGTGAAATAAATCTACAGCAGGACACTGGGCCTCCAGTGACCATGGGTGAGAGCAAAGATGATGTAAACCATACTTGTAGTGAGGGCTCACTTATCACAAATTCTGAGGATCCGTGTAGAGAAGTACAAGGCATGGATAATTTGAATGGTGTAATGCCTTTGTCAAAAGATGGACAAATTGAGGAAAGGGACATTCTTTCTTGTGATTTGGATTGTTTTTTGGATCAAACAATGATGCATTGCAAAGAACTTGATACCTCTCAGGGTGGTTCCACTTGTGCCTCAAATCATGCAAAAATTCAGACTTCATCCACTTCTAATGAAGATGAAATCAATTGCCCAACCATAGATTCACTAAGTATTTGCCAATTGGAAAGGACAACCCCTGATGCTGAAAACGCATCGTCAAAACCTGAACTTGATGAGACATTTGTCATTTCTGGCATTGGAAAAGATCCATGTGGTGACTACCAGTTGGAGAGAATGAATCCAGATCCTGAAAATACATCTCCAAAACCTGAATTTAAAGGTACAACTGGGACATCTGGCCATGGAAAAGATTCACTTGGTGGCTGTCAATTAGAAAGCAACCAACCAGAGCCTAAAACAACATCCTTAAAACCTGGCCATGGAAATTCTTCTCAGCTGGAAGGACAGAAATGCTTCATGTCTGATGATGAACAAGTTGAGAGGAGTAGTTTTGGATTCCTTGAATCTTGTTTTGGTTTAAAAAGTACAACGCAGAACATTGAGGAATTGAAACACCTGGAACATGCACATGTAAATCAAGCTGATGAGTGCAATCTGTTTAATCACAGAGAACCACCAGTTCTTCTAAAAACTGCCTTTGAATCTAATAATCAGATGGATGAAGGAACTGATGTACCAGAAGATCCACTACTACTCAGTGCTGACCAGACATCCAGGACCTTCTTAGATCCTGGACAGCACAAATGTCGGACTGACAATGGCACCATTGCAAGAAAAGATTCTTTTTCATATTTCAAGACCCAAAAGAGAAAACTGCAACCTGTTGTTCTCCTTAAGACGACTGAACAAAAAACTTGTAATGGAAAAAACTACCATTGCTTTGAATGCCAAGAGTCAGCACAAAGTATAGATGAGCTAATCGAGCACTACCACTGCACACATTCTGTCCATAAGTCTCAGTATTGTTCCGCTTGTGAATGTTACTTCACTGGTGACGCATTGGCAGAACACTACTTCTGTGGGGAAGTCAAGCTTAATGACGAGTTAAAATCACCACCCTCATATACTAAAGGGCTAACTGAGGAGAAAGCAAAGTTCATTTGTAGGTACTGTAGGAAGTCCTTTGTTCGACAAGCTTATTATGAAGAACATGAGCTGAAGCACAGAGTTGTCACACATCATAGATGTGACTGTTGTGGATTATACTTTCCTAGTGCTCACAAATGTCAAAGCCACAAGCGTAAAGGAGCTTGCACACCCTTGATACTAGACCCTTCTGTACAGACTGCAGACCATTCAGAATCAACTCTTGGAAAAACAGGTGTACCAGACATGGTTGAAACCACTGTCTCCAACAAAGAACTTCGTGATTGCTTTGTGAAACTAATGGATGTGTACAAGACAAACCAGTCACCTGAACAAATGCATTGTCAAGTTTGTGGGAAGACATTCAGGCTTAGAGCACAACTGAAAGCACACCTTAGATCACACTCAGATGAGAAGCCCTTCAAGTGTGACAACTGTGGAAAAGCATTCAAATATACCTGGAATCTAAACAAACACAAAAGAGAGCAGTGTGCTCAAAAGATTGTCCCACGTGAAAAATCGTCAGTTCCAGATAGCAAGATTCCAAAGTTTAAATGCCCCATCTGTTTTCGCATTTTCAAGTACTCCTACAATCGGACACGACATTTGCGTGAACAGTGTCTCAAAGAATATATGAAAAAAGGCAAAGGAAAGATTGGTGTAAAGTATCGATGCCCTTTGTGTAAGGATGTGTTTACCATGGCCAGCAACCGCAATAGACACATCAAGCAAACTTGCGTTAAACTTAAACTGTATTCAGCCAAAGGTAAAACCGATGTAAAGAAAAGAAAAGAATTAGAGGAAGTTATCAATACCAAAAATCAGGACAAAGAGTCACAGAAATTGACTATGCCTGTACAAAAAGCATTGCAGTACAAATGCACTTTTTGTCCATCTGTGTATTCTAGCAAGTCTGGTTACTACGGCCATCTAGCAAAGCATAAATTGCTTGCAAATGCCAAAAAGGCAATCAAACACAAACATGGTAATGGTGTCGATTCAAAAAGTTCAAGCTCTGCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_05654573_05657504.mRNA True 2932 mRNA 0.41 1 5654573 5657504

Neighbor

gene id symbol gene type direction distance location
CI01000027_05624635_05626386 NA coding upstream 27968 5624526 ~ 5626605 (+)
CI01000027_05612215_05613339 FPR1 coding upstream 41157 5611254 ~ 5613416 (+)
CI01000027_05563090_05579132 NA coding upstream 75427 5560351 ~ 5579146 (+)
CI01000027_05542184_05551414 NA coding upstream 102527 5541415 ~ 5553150 (+)
CI01000027_05489565_05492924 NA coding upstream 161604 5489565 ~ 5492969 (+)
CI01000027_05657678_05659351 NA coding downstream 174 5657678 ~ 5659351 (+)
CI01000027_05659449_05662678 NA coding downstream 1945 5659449 ~ 5662957 (+)
CI01000027_05668637_05672662 NA coding downstream 8871 5666375 ~ 5673064 (+)
CI01000027_05675953_05678901 NA coding downstream 17641 5675145 ~ 5679050 (+)
CI01000027_05684713_05689894 NA coding downstream 27091 5684595 ~ 5689916 (+)
G140946 NA non-coding upstream 44395 5609873 ~ 5610178 (+)
G140920 NA non-coding upstream 46458 5602529 ~ 5608115 (+)
G140929 NA non-coding upstream 86920 5566567 ~ 5567653 (+)
G140894 NA non-coding downstream 92727 5750231 ~ 5753375 (+)
G140950 NA non-coding downstream 164306 5821810 ~ 5822331 (+)
G140869 NA non-coding downstream 249292 5906796 ~ 5911149 (+)
G140893 NA non-coding downstream 300785 5958289 ~ 5959908 (+)
G140875 NA non-coding downstream 356185 6013689 ~ 6017411 (+)
CI01000027_05071693_05072917 NA other upstream 581437 5071693 ~ 5073136 (+)
CI01000027_05069310_05070638 NA other upstream 583705 5067917 ~ 5070868 (+)
CI01000027_05050310_05055447 NA other upstream 598634 5050310 ~ 5055755 (+)
G140440 NA other upstream 868913 4780417 ~ 4785660 (+)
G140436 NA other upstream 875235 4737398 ~ 4774262 (+)
G140862 NA other downstream 55108 5712612 ~ 5712702 (+)
CI01000027_05757143_05758496 NA other downstream 99478 5756982 ~ 5758881 (+)
G140924 NA other downstream 305702 5963206 ~ 5965326 (+)
G141052 NA other downstream 613863 6271367 ~ 6271600 (+)
CI01000027_06706050_06708485 NA other downstream 1048873 6705983 ~ 6708513 (+)

Expression


Co-expression Network