Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000027_05659449_05662678 |
| gene name | NA |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000027 |
| NCBI id | null |
| chromosome length | 10680226 |
| location | 5659449 ~ 5662957 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000027_05659449_05662678.mRNA | True | 3434 | mRNA | 0.43 | 2 | 5659449 | 5662957 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000027_05657678_05659351 | NA | coding | upstream | 98 | 5657678 ~ 5659351 (+) |
| CI01000027_05654573_05657504 | NA | coding | upstream | 1945 | 5654573 ~ 5657504 (+) |
| CI01000027_05624635_05626386 | NA | coding | upstream | 32844 | 5624526 ~ 5626605 (+) |
| CI01000027_05612215_05613339 | FPR1 | coding | upstream | 46033 | 5611254 ~ 5613416 (+) |
| CI01000027_05563090_05579132 | NA | coding | upstream | 80303 | 5560351 ~ 5579146 (+) |
| CI01000027_05668637_05672662 | NA | coding | downstream | 3418 | 5666375 ~ 5673064 (+) |
| CI01000027_05675953_05678901 | NA | coding | downstream | 12188 | 5675145 ~ 5679050 (+) |
| CI01000027_05684713_05689894 | NA | coding | downstream | 21638 | 5684595 ~ 5689916 (+) |
| CI01000027_05691123_05698421 | NA | coding | downstream | 28060 | 5691017 ~ 5698620 (+) |
| CI01000027_05701396_05711410 | NA | coding | downstream | 37919 | 5700876 ~ 5711460 (+) |
| G140946 | NA | non-coding | upstream | 49271 | 5609873 ~ 5610178 (+) |
| G140920 | NA | non-coding | upstream | 51334 | 5602529 ~ 5608115 (+) |
| G140929 | NA | non-coding | upstream | 91796 | 5566567 ~ 5567653 (+) |
| CI01000027_05542184_05551414 | NA | non-coding | upstream | 106299 | 5541415 ~ 5553150 (+) |
| G140894 | NA | non-coding | downstream | 87274 | 5750231 ~ 5753375 (+) |
| G140950 | NA | non-coding | downstream | 158853 | 5821810 ~ 5822331 (+) |
| G140869 | NA | non-coding | downstream | 243839 | 5906796 ~ 5911149 (+) |
| G140893 | NA | non-coding | downstream | 295332 | 5958289 ~ 5959908 (+) |
| G140875 | NA | non-coding | downstream | 350732 | 6013689 ~ 6017411 (+) |
| CI01000027_05071693_05072917 | NA | other | upstream | 586313 | 5071693 ~ 5073136 (+) |
| CI01000027_05069310_05070638 | NA | other | upstream | 588581 | 5067917 ~ 5070868 (+) |
| CI01000027_05050310_05055447 | NA | other | upstream | 603510 | 5050310 ~ 5055755 (+) |
| G140440 | NA | other | upstream | 873789 | 4780417 ~ 4785660 (+) |
| G140436 | NA | other | upstream | 880111 | 4737398 ~ 4774262 (+) |
| G140862 | NA | other | downstream | 49655 | 5712612 ~ 5712702 (+) |
| CI01000027_05757143_05758496 | NA | other | downstream | 94025 | 5756982 ~ 5758881 (+) |
| G140924 | NA | other | downstream | 300249 | 5963206 ~ 5965326 (+) |
| G141052 | NA | other | downstream | 608410 | 6271367 ~ 6271600 (+) |
| CI01000027_06706050_06708485 | NA | other | downstream | 1043420 | 6705983 ~ 6708513 (+) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | XLOC_009916 | znf1035 | coding | NC_007127.7 | CM002900.2 | 25011994 ~ 25038855 (+) |
| mexican tetra (Astyanax mexicanus) | G98312 | NA | non-coding | NC_035907.1 | CM008310.1 | 8187644 ~ 8197794 (-) |
