CI01000027_05657678_05659351


Basic Information

Item Value
gene id CI01000027_05657678_05659351
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 5657678 ~ 5659351 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_05657678_05659351.mRNA
ATGACTCACAAAAATGTGCATAAGCGGAATGTACAGTGTTTAGTCTGTTGGGAAGTTCTACCATCTATTGGAGATTTGTTAAAACACAGACAGTCCCATCCAAAAAAAGGCATGCTTAAGTGCCCCGATTGCCCGCTGCAATTCAGGTTTCCAGTATTTCTGCTTCGACATGTGGCTGTGCATGAGAGAAGACGCAAACTTAAAGAACTTTTCCCTCCAAAGGACCAAGCTAGAACTCTAAAGGTAGAAAGGATTTACAAAGAGGAGTTCAAATGCGCTCTCTGCCAAGAAGCCTTTCCTGATTCAAAGGCACTTAGTGAGCATTGTATAACTCATATGCCTGAACCTTCTGCAACCAAATGTCAGTTCTGCAAAGGCCATTTCTCAAATCATGCTGGGCTGATTCGTCACATCCGCCTTCACACTGGTGAAAAGCCTTTTCCGTGTCTCACTTGTGGCAGACACTTCAACAGAAAGGAATATCGCAACGTACATCAGGAAAAATGTACAGGGGAGCAACCGCCTTTATTACAGACGTCAAATGCTGAAGAAACACAGGCAGAACACAGCGTAGATAGTGCATTAAGCAAGACCAACAAGCTCTATAATTGCTCATACTGCCCACATTCATTTCGTTTTCCCAACAATTTGAAACTCCACGAGAGAGCCCATTTGGCAAAGACAGTTTTCCCTTGTTCAAAGTGTGGGAAGTTTTACAGGAAAAGAAAATTTAAGGCTCATGAGGAGATCTGCAATGGAGACAAGTTAAAACCTGCTTGCAGAAAATGTGGGAGAGTTTTTACCAGAAAAAACTACAGAAACGGTCACGAAAAGCAGTGCCAGGGCAAGCTATCAACCGAAAACAAAACTGGTACAAAGGAGGAGGGCAAGTTTAAGCAGCAATGTCCAAAATGCTTTAAATGTTTTAGAACTAGAAGTTTTCTCCAGAAACATCTCTCTCTTCATTCAAAGGAAACCCCATATGTGTGCATGCATTGTGGACAGAAATTTGACAATCAGGATCGATACTTGCAACATGAGGCTTTTTGTGATGGTGTGACTAAGGAACGTAGATTGGAAAGTTTAAAAGGATCTGAGAAAATTAAATCGATGTTCGCTGAAGAAAAAAATCAGAAAGGCATCACTGTGGTTCATGGGGAAAATGGTGAGTCATTGAAGTGCAAATTTTGCACTAAATCATTTTTGAGGGCCAGAAATCTAAGACATCACATCCTCACTCATACAGAGGTCAAGCCATATCGGTGCAAGACTTGTGAAAGTTGTTTCTCACGCTATGATCATTTAAAATTGCACCAAGCCCGCTGCAGAGGAAAACGACGACTTGAGGTGCGAGTTGTAAAGATGAGTCTCGACAGCTTGAACACAAGTTCCCAAAGCAGAACACAGGAAGGTGACCCATTGCAATGCACAGTTTGCTTAAAGCGGTTGTCCACCCAGAGTGATCTGAAGCGCCATATGGCCATGCTCCACATTACCGATAAACCTTTTCCTTGCAAAAGATGTGGCAAAACTTACAGTACTAAAAAGACTTTGAGCAGGCACAACCTCACCATTAGATGCAAAAAGGTTTCAAAGGAAAGTGTGCCATCTGCCACAAACAATGTTCAAAACCAACCATGCAGGGAAACTTCCAAGCTTCTGCAACGTATACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_05657678_05659351.mRNA True 1674 mRNA 0.42 1 5657678 5659351

Neighbor

gene id symbol gene type direction distance location
CI01000027_05654573_05657504 NA coding upstream 174 5654573 ~ 5657504 (+)
CI01000027_05624635_05626386 NA coding upstream 31073 5624526 ~ 5626605 (+)
CI01000027_05612215_05613339 FPR1 coding upstream 44262 5611254 ~ 5613416 (+)
CI01000027_05563090_05579132 NA coding upstream 78532 5560351 ~ 5579146 (+)
CI01000027_05542184_05551414 NA coding upstream 105632 5541415 ~ 5553150 (+)
CI01000027_05659449_05662678 NA coding downstream 98 5659449 ~ 5662957 (+)
CI01000027_05668637_05672662 NA coding downstream 7024 5666375 ~ 5673064 (+)
CI01000027_05675953_05678901 NA coding downstream 15794 5675145 ~ 5679050 (+)
CI01000027_05684713_05689894 NA coding downstream 25244 5684595 ~ 5689916 (+)
CI01000027_05691123_05698421 NA coding downstream 31666 5691017 ~ 5698620 (+)
G140946 NA non-coding upstream 47500 5609873 ~ 5610178 (+)
G140920 NA non-coding upstream 49563 5602529 ~ 5608115 (+)
G140929 NA non-coding upstream 90025 5566567 ~ 5567653 (+)
G140894 NA non-coding downstream 90880 5750231 ~ 5753375 (+)
G140950 NA non-coding downstream 162459 5821810 ~ 5822331 (+)
G140869 NA non-coding downstream 247445 5906796 ~ 5911149 (+)
G140893 NA non-coding downstream 298938 5958289 ~ 5959908 (+)
G140875 NA non-coding downstream 354338 6013689 ~ 6017411 (+)
CI01000027_05071693_05072917 NA other upstream 584542 5071693 ~ 5073136 (+)
CI01000027_05069310_05070638 NA other upstream 586810 5067917 ~ 5070868 (+)
CI01000027_05050310_05055447 NA other upstream 601739 5050310 ~ 5055755 (+)
G140440 NA other upstream 872018 4780417 ~ 4785660 (+)
G140436 NA other upstream 878340 4737398 ~ 4774262 (+)
G140862 NA other downstream 53261 5712612 ~ 5712702 (+)
CI01000027_05757143_05758496 NA other downstream 97631 5756982 ~ 5758881 (+)
G140924 NA other downstream 303855 5963206 ~ 5965326 (+)
G141052 NA other downstream 612016 6271367 ~ 6271600 (+)
CI01000027_06706050_06708485 NA other downstream 1047026 6705983 ~ 6708513 (+)

Expression


Co-expression Network