CI01000027_05724339_05733809


Basic Information

Item Value
gene id CI01000027_05724339_05733809
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 5723434 ~ 5733859 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_05724339_05733809.mRNA
CTATAAAACCGGTATCGTACTGCTGTTCTAAATATCAGCATGGCTATGATTGCTTGTGGTCATGATTAGTAAATAAAATGCAACCATGATATTACTTATTTCATGGTATTAAAAGAATATATTGTGCTCAAAATGTATACTTTTAATTCATGAACTTAGTTGCATCTTTTCATTATGGGGACCAGGAAGTATAGGACCTAAATATAAAAGAAGTCTCACAGGTTTGAAAAAAGAAATTTGTAGTTAATAGGGGAAGGCCCTGTTTCTGAGTGTGAACAACCAGTTAGATGCTTAGCCAGGGAAAAAAGAGTAGCAGAGAAATACGACAGAGGCCATGGCAAGATTATAGAAACATGCAAATAAAAAGTTTTTACTTGACCACTTACTGTTTTGTTAACATTAATACATTTTTTGTGCAGTTCCTTAATAAGTTAGGCTGATTATTCACAGAGTAATCAAAATCTAATTGTTTATTTAATAAAATGTATTTACATTTAAATATGTAGGGGCTTGTTTAAAAAATAGGTGGGGTTAAATTATCTTGTCAAGTTTGCAATTACATAAAGCAATTTAATTTTGTCGCTTTATGATATTTAGATGAAAGATTAATATTAAAGACCCACTTTATTGGAAGGCTGTTCAAATATATTTAAGAAGCTTAGTTATGACTGGGCTTAATAGACTCACTTCTTTTACCATGCTAATGATTAATGATATTTACATAGTACAATCATACCATTTTGGCAGGTTCAAAATTGTATGGTGCATTATGACATGGGATGTGGTTTTATGTTTTAGTGTCTTCCTCTTATCTTTGTTAGTTAATCTGCATAATTTCTTTCTCTTTTAGGAGAACTTTAGAGATCTGAGTCCAGTTGTACATTGAGTTTCACATCAGAAACATCATGGAATATACTAATGACCCACTCAGTGAACCATCTGCTCCTGAAGCAAATCTGCACAACGAGCACCTTTCACTTTCAGACCAACTGTCTCCTTTGGAAGCACCATTAGATAGTATTGTACATGGAATAGAGGCTACAGAAAGTACAGATCAAACCAGTGGTCTTGAGTTGAAACTGGACCTCTATGTCCCAGCACCACCAATAATAGAACCTATAACCCCTGTAGAGGAAACAGTGGAGCACTGTGCTTTTCCTGTGGCAACACAAGAGGACAGCACACAACCTGAAGCCGTTACAGAGGAAACCGATGAAACGGCTGATGTTGAAGGCTTGCATTGTGAAAATCAGTCAAGTCTGGCTGAGTCGAGTACAGATACTGTGACAGAAGTGGAATGTGAGCATGCATCCAATGAATCAGGCTCATCAGACTGTAATGCTGCAAGTTGTGTGCTTGAAGAGCCCATAAGCTCCAGTGAAACACCAAAAATGTGTGCCAACATTAAATCATCAACTGGAGGTACAGTACACAATGCCGACAGAAAGAACATCCCTCCAAAGAAGGACAAATTTAACCCTCTGAAAATTGACATGGCCAAAGTAATACCTCTCACCTCATCCCAGCTCTCACTACAATGCCTAGAATGTCACATCATCTTCAGTGACTCCAAAAGCAAAGATCGGCACCTTAAAATGAGCCACCCTGAAGAGTATCAGCAGTGCATTCTGGGAGATGTCCTCTTTACTTGCTATGTTTGTGATCAGCATTTCACCTCCTCCACAGAGCTCATGGCCCATCAGCGCACACACACTGGTAATGAGCGGTTCAAGTGCCCGTTCTGTAGTGAGGCCTTCTACCAATCCTGTGAGCTAACAAGTCACAAAAAAAAAGTTCACTACAGCAAACATGGATACACCTGCTCAGAGTGTGACAAGCCTTTCAAAACCTTTACTTTGCTCAGATACCACCAACGGGTACACTCAGCGGAAAAGCCATATGTTTGCTCACACAAACACTGTGGTAGAAAGTTTTCTGCATCCAAGTCTCTTCAGAATCACTTAGAAAAACATCAAAAAGAAGATGCCAAGGGTGACCAGACAAATGCTTCAACCACCACAAAGAAAAAGAGAACTAAAGGAACAAATGAGCGGAAATTCCCATGCTCACAGTGCGGTGCAGTCTTCAAGACTTCCAAATCACATCTTCTTCACATCAAAAATAAACACTCTAAAGAGTCACAAAGTAGTACTGTGTTGGTGCCACAGCCAAAACCACCTGGACTTACTATGACACAGACAGCAAATGGACAACCACCGACTCTGCTCATGGAAACCGTCGGACCAGCACCACAGCAGATTGACAAGCTGGATGCTGAGCAAATTAAAAGACTAATTGAGAAACTTGGAAATGTACAGAAAGTCAATCAGTTGGTTATATTGCCTTTGCAGCCACAAAGCTTTGGGTTACCCCACCCTCAACCATTAATGCAACCATTACATGTGAATTTTACTCAATCAACCATTCAGCCAACACAATGTGAGCAATCTAACACAGGCCCATCAAAAGCAGAGCAAATTAACCTCCACGTGTCAGCAGAGATGGGAGATTTGCAACAAAAGGAAACTGTTCTTTTACAAGAGGAAACCATTATTTCACCAGAAAACTCAGAGACCCAAGTAGCACCTGTTGAACTGACACAAACAGAGGTTCAAATGCAAATGGATGAAATTCACCTTGAACTTATACCAATACAGACTGAAACTTCGGTTTTGCTGGATCAAACACCTTTACAGGATGAAGCATCACAAAATGACTTGGTTCATGAGCTGTCGCATACAGCAGAGGAACATATTCCAGTCACTCAAGACATTGCAGCTTTAGAAACAAACAGTGAACCACCTTTAATTCCTCAACCTGAAACAGCAAATTCTCATCATGTGGAGGAGGACAATGTGCCGGTCGACACAGTAACATCTGAGGAGACCGTTACCAATGCAGAGACACCATGTCCTACACAAATTCAAGATTCAACAGACTTGTCAGTGGAATCAGACTCACAGGTGGTAAGTGAACAGGATGATATAGGCAAATTAAGTGAGCCTCAAGAACTTCAGGAAATCCAAGCTCAAAAGGACCAAGTTGAGTCAGAGAAAGATCCATCCATGGTGGAACCACAATCTCAGCCGGATTCCCTCAACAGTGTGCAGAACAACACCTTAATTGACATACAACAAAGCTCTGTGCCAAAACCAGACCAGACTATTTTACAGGATTGCCCTTTTGTTCAGAAGAAACTTCCAACGAAGAAAAAAAGATCTAAGAAACAATTGGCTGACAAACTAGAGACTAAGAAAGCAAGTAAAGTATGTGATGGCCAGGTAGCATCAACCAAAAAAGTTAATACTTCATCAAAAGTGATTACTAAGAAAAAAGAAAAGACAAAGAACAAAAAGCTTGTTGTCAGATTTGGACCAAGCGAGAAGAAAAAATCCTCTAAACCGAAGGTAACATCTAAAACGAAACAAAACCAGAACCAGCAAATTAGTGATCAAGACCAAGTGCATATATTGTCTCAGCATGACGATAAATTGGATTTTAACCAAAAAGTGCAAAAAGATAAAAAAGTAAAGGGGGTTGAAAGTCCTTCGGGAGTAGCAGTGAAGTCAACAGGTGAAATGAATAATGCAACAGACACTGTTTTGGTGGCACCAGAAGCAACACAACAAGGGAAACCTCAGAAGAGAAAAATGAAGAATAAGAACAATTTGGTCAAGAAGGCACAGTCTGTCCAGGAGGTTCAACAAGATGAAACACTTGTACCTGTGCGAAAGAAAAAGAAGCAGGGCAAAACATCTGAAGACGATTGTCCCAAGAAACCCAAAGTTAGAAAGACCCAAAATAATAATTTTCAGAAGAATACCCACAAATTACCAAAGCATAAGGTCACACAGGCAAAATCCAAACCTGATGTTCCAGACCTGCCTGAAATAGAGAAGCAAGCTCTGCTCTTATTAAAAGGTCACAAGCAGCCTCAGCTGAAAGTACACAAGTTAGATGCTACTGAACTTGAGAAATCACCACCAAGCAAATGTGATAAAAAGGTACTGCAAAAAACAAAAAATGCATCTAGTAAATCCTTGAATGTAGCACGCCAGAAGAAAGCAAAATCAGTTGAAAATAAATTGGTGGAGTATCAAGGAGAGCCCTTTTCTTTTGAAATGCCCTCTGTTGAGAACAACGATGGTTCTGTGTCTACAAAGCCCAAAATTGTACGAAAACGCAAAGCTCCTACAAAAATAGACCAGGAAATTGCATTGAGCCCTCCATATTCTCAACTTACTCTTGGGTGCCAGGACTGTGGGAAGACATTCTCTGAAGTGTCTGCTTTACAGGAACACATGGCAGCCTGGCACTCTGCTGGAAAGGTGGCCTTCCCAGATGAGACAATTGTTGCTAAAAAACGAGTCATGAGCTCTAGTCCTAATGAAAAATATATTTCACCTAATGTATTTGAAATTCATGTTGCAACAGACTGGGATATGGAGACTGAGGTGGGGGAGATTGGGGGAGAAAGACTATCATTCCCAGCTTTAAGCCCATCTCCTTCTTTGACACTTGCTTCTGGTGGTGTTGAAGGAAGGCAACAGGAAGAAGACAAAGATGTTGAAGGAATTGTTCCTGGACCTGAGCAACCTCCAGAGAAAAATCCTTTAGAAGTTTGCAAGATCCCTTCACAGATGTCTACCCCAGCCTTAGTCAAAACTATTGTGCCCCAGGAGCTAACTGAAAATGCTAGTGAGAGTGTGTCAGAAAAAGAACAGAGCAATGAGGTTGGGACCATCACAGAAACTTCTTGCACTGAGCTCAAAGATGCATTGGAGGAGGAAATTAAAGAAGAACTGCCCTTAGGGGTTAATTTAGTCATGGTTGGAGACCAAAATGAGGATGAGAACCATAACACTCAGATAAATAACATTTCTGGTGTCTCTCAAGAGAATGAAAATGAAGTAAGCAATCCATGTTCTCAACCTCAAGAATCTACTAATGAAGTATTAACTCAAAAAGTTCTTACTGAGCCAGAGATAAAGCAAGAAGAAGAGGAGGTACTTGTACGAAGAGTTGATGATCATAAAAGAGTGATGGGAGGACATTCTGTGAAGAGAGGTAAGAAAGGAGTTGGAAGAAACCAGGGCAAGAGACCGGTTGGAAGAAGAACTAGCACAGAAAACAAAAGTAAAAAGGACATGGACGGAAATAAGGATCCACAAGAATGCCAAGTGCTCTATCATATGTGTGTACTTGATACTCCAGAGAGAAAGAACAAAGAAACGGACAAGAATGGAGTTAATGCCTCTGAAACTTGTCAGCCATCATCTTCTGAGGAGGCTCCTGAGGAACAGGTAGTTTTTGAGTTAGACTCTGTTACCACGAGTGTAATGGACATTGTGAACTCTGAAGATGGATCATTCGAGACATCTAAAGAGCTGGTTAGAGACGGCAGCTCTCCTGGAATCATATTGGAAAAATTCTTGACAGCACGTGAGAGAAATATGGAAAATCCAAACACCCAGAATCAGATTAGACGGAATTACATAATTTTCTCATTAAAGGCAAACTCCAAGTTGGATACCAGTAAAGTGACTTCAGCTTACACATCTTCTGACACGAAAATAGAAGAACGTTCTTCAAATTTGGCTCACCACAGTCTGATTTCTTCTGAGAGTTGTACGATGCGTGGAGTACAGATGTTTATTGTAAAAGCAGAAGACCACTTGACTACGAATGAGATGTTCCAGCCTTCAGATCCTCACCGTGTTGCATGCCAAGATAAGAACAGAGATGGCACCTCTTCAGACTCTCATGTAGTGCCCCTGCAGACCTACAGCAAGCAATGTATATTTTATCCTGTTAAGGAGGAAGAGAGGGAACATTTAGTGGAGCCTCCTCATGCAGAACAGACATGCTTGGATTCGGGGGAGCTTGCAGGTGATGTTAGTGCTGAACAGCAGAGAACTCAAGACTTTCTAGAATTCCTCTCTGAGAATTCAGACACAGATGATGCCGATAGTGTCCATTCTGAACCAGAAGCTGAAACCATTCTGATGTCCTGTTACCATGGAATACAGAGTAATGGTACAGTACATCAGAAGAGCATAGAGATATGTGGTCCAAGTGGCAGAACAAACATGGGTGCCTCTCCAACAAGGCACAAAGAACCAGAGAGGCAGCTCAACTGGAAGCCCATTAACTATTTCAATCAGTATTTTAGTTTGGACACGTGGAATGAAATTGCTGTCTGCACAAGAGAAACATCAAAACTGCCAAACCCTGTTACAGAAAAGGAGGTCGCACAGTATGTGGGAATCCACATTGCAATGGGAACTCTGAAGTTTCCCAGCACAAAGCTCTACTGGGAAGACTGCACGCGAGTACCTCTGATCTCCGATGCCATGTCGGCTTCAAGATTCTGCGAGCTCACTCGTAAAGTGAAGCTGGTTAGTTCTGGTGGAGCTTCCATGGAGACAAGTAGCGATCAGCAGTCTGAAGAAAGTAATAGAAACCAGCCAGGACAGAGTAATGAAGCGCACAGTAATGAGAATGCACATAACTGTGCAAACTCAAAGACAGATCCTTTGTGGAAGGTTATGCCGTTGATTAGAAGAGTTCAAGACGGTTGTCGGGCATTGAAGCGAAATGGAAGTTATGGGGTCGACCAGTACCCCCTTCCTTTTCAAAGACACCCAACCCATTCTTTACTTCACACAGTTGTCGTAAGTGGTGGAGGGTTGGTTGTGGACTTCAACTTGAGTGCAGATGACTCCAATAGAGAAAATGTAGTTGAGAAAATGGTCTCTAGGGGTAAAGACGGCAATGAAGGGATGGTGTTTCTTTGCAAACCAGAGCTTTCCACACCTTCTATGCTAGAGCATCTTTTAGAGGTGGGTGTGCAAAGCGCTGGCAAGGTTGGTGGGGCAAGAGGGCAAATAGGTGACGAGTTTGTGAGCTCAGATGGAAAACTCAAACTTTTCAGATGTCATCATGGCTTTATCCTTTCAGCAGTGGTAAAGGAGAAGCCACGCTCAACATCTCTTGTCAGTGGCTTTGAGCGAGCGATTAAAGCTGCGAATCTTAACCGTGACTTGAGAAGTCTTTATCGTACTCCATGCACAAACTCGGCAGTCAGCGCTTGGCCACATTCTGTTCTCTGGGACTTGATTGATCTGGTGTTGGTAAATGCATGGATACAGTATAAGCAAGATTACAGTCATATTACAGATCTGTTATCACTTATGGCATTTCGTTTGGAGGTGGCCAAAGCATTGATTCTTTCCAGTGGCGTTGATGCACAAGACTCATCCCCCCCCTGCCCTCCTGCTCCCAAACTACACGGCCCAGATACAAACTCAAGACCTTCTCAGGTTCTTGAGACCCCTTTGCCAGATGAACATACACGATACGATGGCTTTGGCCACTGGCCAGAGCAGCTGGCTGAGGGCGATGAGGCCAGGAGGTGTAGATTCGGAGGCTGTGAGAGAACATCACGTGTGCGTTGTCTCAAATGCTGTGTGTTCCTGTGCATTTCTCGAAACCACAACTGTTTTCTTAAGTTTCATAGTCGGGGGTCTTCATGAGGATTACAGGCTGTGAACATTTAAACTTAAACATTTACTCATTTACTTAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_05724339_05733809.mRNA True 7585 mRNA 0.42 8 5723434 5733859

Neighbor

gene id symbol gene type direction distance location
CI01000027_05719979_05720814 NA coding upstream 2100 5719903 ~ 5721334 (+)
CI01000027_05711573_05714490 NA coding upstream 8861 5711477 ~ 5714573 (+)
CI01000027_05701396_05711410 NA coding upstream 11974 5700876 ~ 5711460 (+)
CI01000027_05691123_05698421 NA coding upstream 24814 5691017 ~ 5698620 (+)
CI01000027_05684713_05689894 NA coding upstream 33518 5684595 ~ 5689916 (+)
CI01000027_05735304_05738483 ZNF576.2 coding downstream 1268 5735127 ~ 5738924 (+)
CI01000027_05740951_05748956 NA coding downstream 7092 5740951 ~ 5748956 (+)
CI01000027_05757143_05758496 NA coding downstream 23154 5756982 ~ 5758881 (+)
CI01000027_05781043_05784234 KLHL38B coding downstream 46747 5780606 ~ 5784415 (+)
CI01000027_05789308_05795504 FBXO32 coding downstream 55297 5789156 ~ 5796059 (+)
G140858 NA non-coding upstream 41975 5619656 ~ 5681459 (+)
G140946 NA non-coding upstream 113256 5609873 ~ 5610178 (+)
G140920 NA non-coding upstream 115319 5602529 ~ 5608115 (+)
G140929 NA non-coding upstream 155781 5566567 ~ 5567653 (+)
CI01000027_05563090_05579132 NA non-coding upstream 156964 5560351 ~ 5579146 (+)
G140894 NA non-coding downstream 16372 5750231 ~ 5753375 (+)
G140950 NA non-coding downstream 87951 5821810 ~ 5822331 (+)
G140869 NA non-coding downstream 172937 5906796 ~ 5911149 (+)
G140893 NA non-coding downstream 224430 5958289 ~ 5959908 (+)
G140875 NA non-coding downstream 279830 6013689 ~ 6017411 (+)
G140862 NA other upstream 2669 5712612 ~ 5712702 (+)
CI01000027_05071693_05072917 NA other upstream 650298 5071693 ~ 5073136 (+)
CI01000027_05069310_05070638 NA other upstream 652566 5067917 ~ 5070868 (+)
CI01000027_05050310_05055447 NA other upstream 667495 5050310 ~ 5055755 (+)
G140440 NA other upstream 937774 4780417 ~ 4785660 (+)
G140924 NA other downstream 229347 5963206 ~ 5965326 (+)
G141052 NA other downstream 537508 6271367 ~ 6271600 (+)
CI01000027_06706050_06708485 NA other downstream 972518 6705983 ~ 6708513 (+)
G141082 NA other downstream 1164552 6898411 ~ 6900923 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_009924 znf576.1 coding NC_007127.7 CM002900.2 25137483 ~ 25163213 (+)