CI01000027_05789308_05795504 (FBXO32)


Basic Information

Item Value
gene id CI01000027_05789308_05795504
gene name FBXO32
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 5789156 ~ 5796059 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_05789308_05795504.mRNA
ATATAAATACAGCTGCGCACTTTTATCATCAGAGACGCGTTCACAGCATTATTTAACATAGCAGCCAACACGCGAGAAAATCACTTTAACAACTTCTCAAGTTTAACACTACCAAGTTTTCCTTCGTAATCACTGGTTTTCATATCTTGACAATGCCGTTTCTTGGACAAGACTGGCGGTCTCCTGGTCAAAGCTGGGTGAAAACGGAGGACGGCTGGAAAAAAACGATCAAAGATGAAAACGAGACGAATAACAATGTTTCAGAACGGAAGAGCTACTGCAAGGAAGAACATGACAAGGAGAATTTGATCCTCAGCATTAATTATGATGTGGCTGCAAAGAAGAGAAAGAAGGACTTGCTAAACAACAACACAAAGATTCCTTATTTTTACAAAGACAAATGGATTTACGTCCACAAAGGAAGCACCAAAGAGCGACATGGATATTGTACTCTGGGAGAAGCATTTAATCGCTTGGATTTCTGCAGTGCCATCAAAGACACCAGGCGATTCAATTATGTCGTACGGCTGCTGGAGCTGATCGCCAAGTCCCAACTGCCTTCGCTGAGTGGAGTGGCACAGAAAAACTACATGAACATTCTGGAAAGGGTTGTGCAGAAAGTTCTTGAGGATCAGCAAAATGTTCGACCAATTAAAGAACTGCTGCAGACACTATATGCGTCGTTGTGCAGTCTGGTTCAGGACATGGGCAAGTCTGTCCTGGTGGGCAACATCAACATCTGGGTGCACCGCATGGAGAACATACTACAGTGGCAACAGCAGCTTGACAATATTCAGATCAACAGGCCTACAAACACAGGGATGACATTCCTTGATCTGCCGGCTAGCTTACAACTGAATATCATGCACCGTCTTTCAGACGGACGAGATCTGGTTAGCCTGGGTCAAGTATGCCCTGACCTAAGTGTGCTGACAGAAGATCGGCTGTTGTGGAAGAAGCTCTGCCAGTATCACTTTGCAGACAGACAGATCCGCAAGCGCCTAATAGTGTCAGATAAAGGACAATTGGAATGGAAAAAGATGTATTTTAAGTTGTGCCGGTGCTACCCTCACAAAGAACAGTACACTGACACGTTACAGTTCTGCACACATTGCCACATCCTGTTCTGGAAGGATACAGACCATCCTTGCACTGCCAATAACCCAGAGAGCTGCTGCAAGCCTGTCTCTCCACAGGGTTTCATCAACCTTTTCAAATTCTAGGGGGCGCTGCATTGCTGCCATGTACATAGTGTCAATAGTGCAAAGGATTCCTGGATGACTTGAGGCAGGGAAAAGATGGGGTGGCATTAGAAGCAAGTGTCATAATGTTTTGTGGAGAAGTTTAGAAACTGAATGTACTCGAGAAATATGCGAGATGAGAAACTAAAAAGCTGTTTTGGCGGAAAATATGCTCCATTTATTTAAAAAGGATTTATTTATATTTATTTAGCATGGATCTTGTTTACTCAAAGTTACATTAAAGGTTAGAAAAAGGATATTTAAAATGATCCTAACTGCATAAAAAGTTGCCCTTGTGCTGTCAGGATGCCCTGGTTTCTTCTGTGAATGTAATATAGGTTTGAGTTTTGGCAACACAAACATTTGAGTTTCAGATAGCATATTGGTGCTTTAGCGAGTGCATGTAATGGGAATGTTTACCAAAATGGCCTTAACACTGGTGTGCAATACTTTTTTTCTAAGTAATTTTTTTTTCCACTTTTATACATTTGATATTTTCAGTGGTTTGCGATTTAAACATGCTTGTTTTTCTAAACA

Function

symbol description
fbxo32 Acts upstream of or within several processes, including cardiac muscle tissue morphogenesis; heart contraction; and muscle cell cellular homeostasis. Located in cytoplasm. Is expressed in cardiac muscle cell; muscle; skeletal muscle cell; and yolk syncytial layer. Orthologous to human FBXO32 (F-box protein 32).

NR:

description
atrogin-1

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K10305 FBXO25_32; F-box protein 25/32

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_05789308_05795504.mRNA True 1778 mRNA 0.42 9 5789156 5796059

Neighbor

gene id symbol gene type direction distance location
CI01000027_05781043_05784234 KLHL38B coding upstream 4741 5780606 ~ 5784415 (+)
CI01000027_05757143_05758496 NA coding upstream 30275 5756982 ~ 5758881 (+)
CI01000027_05740951_05748956 NA coding upstream 40200 5740951 ~ 5748956 (+)
CI01000027_05735304_05738483 ZNF576.2 coding upstream 50232 5735127 ~ 5738924 (+)
CI01000027_05724339_05733809 NA coding upstream 55297 5723434 ~ 5733859 (+)
CI01000027_05805062_05805690 NA coding downstream 9003 5805062 ~ 5806023 (+)
CI01000027_05807381_05817636 TBC1D31 coding downstream 10970 5807029 ~ 5817665 (+)
CI01000027_05820700_05833750 DYNC1I1 coding downstream 24408 5820467 ~ 5834241 (+)
CI01000027_05836494_05847115 NA coding downstream 40435 5836494 ~ 5847601 (+)
CI01000027_05882855_05906234 JARID2A coding downstream 86796 5882855 ~ 5906234 (+)
G140894 NA non-coding upstream 35781 5750231 ~ 5753375 (+)
G140858 NA non-coding upstream 107697 5619656 ~ 5681459 (+)
G140946 NA non-coding upstream 178978 5609873 ~ 5610178 (+)
G140920 NA non-coding upstream 181041 5602529 ~ 5608115 (+)
G140929 NA non-coding upstream 221503 5566567 ~ 5567653 (+)
G140950 NA non-coding downstream 25751 5821810 ~ 5822331 (+)
G140869 NA non-coding downstream 110737 5906796 ~ 5911149 (+)
G140893 NA non-coding downstream 162230 5958289 ~ 5959908 (+)
G140875 NA non-coding downstream 217630 6013689 ~ 6017411 (+)
G140889 NA non-coding downstream 369701 6165760 ~ 6170544 (+)
G140862 NA other upstream 68391 5712612 ~ 5712702 (+)
CI01000027_05071693_05072917 NA other upstream 716020 5071693 ~ 5073136 (+)
CI01000027_05069310_05070638 NA other upstream 718288 5067917 ~ 5070868 (+)
CI01000027_05050310_05055447 NA other upstream 733217 5050310 ~ 5055755 (+)
G140924 NA other downstream 167147 5963206 ~ 5965326 (+)
G141052 NA other downstream 475308 6271367 ~ 6271600 (+)
CI01000027_06706050_06708485 NA other downstream 910318 6705983 ~ 6708513 (+)
G141082 NA other downstream 1102352 6898411 ~ 6900923 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other downstream 1156887 6951132 ~ 6957767 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location