CI01000027_05820700_05833750 (DYNC1I1)


Basic Information

Item Value
gene id CI01000027_05820700_05833750
gene name DYNC1I1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 5820467 ~ 5834241 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_05820700_05833750.mRNA
GTATATGAACAAACAAAACTGGATGTATAACTTCATCCACTGAAATTCAGCAAAATGTAGACACAGAAAAGACCTTCACAAAATTTTAAAGCCAAAGCACATTCCCTGGATAGCCTCTAACGTGTTCCTCTTCGTTGAAAGTTTGTGTGACCTTATAGTTTATGTATTTTTGAAACATTACTAAACTTAAAATTAAAACTGTTCATACTATACATAGATTGAACAACACGAAGATGGCTGATAGAAGTGACCTGAAAGCTGAGCTTGAGCGCAAAAAGCAGCGCTTAGCCCAGATTCGAGAGGAGAAGAAAAGAAAGGAGGAAGAGAGAAAGAAGAAAGAGTCTGAGATGCTTCAGAGGACTGAGAATGTGTCAGAAGACTCTGACCTAGACAGAAAGAGAAGAGAGACAGAGGCTCTCCTGCAGAGCATTGGGATTTCACCAGAACCACCTTTAGTGAGCCCGCCCAGTGAAACTGGAAGTCAAGAGTCCATAGATGGAGGGACGGTGGGAAGGACGTTGCAATGGGACACCGACCCCTCAGCTCTTCAGCTTCTTGCAGATTCTGTTCATGGGTGCAAGATGCATAGGCTTGGAGCATCAAAAATTGTTCAGATTGATTTCATGCCAAAAGAACTGGTGACATACTCCAAAGAGACGCAGACCCCTGTCGCATCTGATCAGCCTGAGGAGGAGGAGGATGAGGAGCTGTCAGTGCCCAAATCTGAGCCGGTGTCACAGCAGCTAGAAGAGGAGAAGCCTCAGGAGGCTGAAGAAGGCAAGAACAAAAAAAAAGAAATTCATCCTAGAGAACTCACCAACGAGGAGAAAGAGCAGATTGTTCATTCAGAGGATTTCCTGTTTTTCTTCGACCGAAGCATCCGTGTAGTGGAGCGAGTGCTGGCCGAGGATACGGACATTTTCTTTGACTACAGTGGGCGAGATATGGAGGACAAAGAAGGGGACATGCAAGCCGGATCAAACTTGTCTTTTAATCGACATTTCTATGATGAGCATTGGTCTAAACATCGAGTCGTCACTTCCCTGGATTGGTCACCACAGTATCCTGAATTGCTAGTGGCCTCGTACAACACTAATGAGGATGCGCCTCATGAGCCAGATGGAGTTGTGCTGGTCTGGAATATGAAGTTTAAGAGGACGACCCCTGAGTACATATTCCACTGTCAGTCCTCAGTGATGTCAGTTGGCTTTGCTCAGTTTCATCCCAACCTGGTGATCGGAGGCACTTACTCAGGACAGATAGCACTGTGGGACAATCGAAGTCACAGGAGGACCCCAGTGCAAAGGACACCCCTGTCTGCAACCGCACACACTCATCCTGTATACTGTGTGAATGTGGTCGGAACACAAAATGCCAACAACCTGATCACAGTATCCACAGATGGCAAGATGTGCTCCTGGAGTCTGGACATGCTCTCACAGCCTCAGGAGAGTATGGAGCTGATCTACAACAAGTCAAAGCCTGTGGCAGTCACTTGCATGGCCTTCCCTGCAAGCGACGTGAATAACTATGTGGTAGGAAGTGAAGAGGGTACCGTTTACACAGCATCCCGCCATGGGAGTAAGGCTGGTATTGGTGAAATGTTCGATGGGCATCAAGGTCCTGTGACTGGAATCAGCTGCCATAACTCTGTGGGCCCAGTTGACTTCTCCCATCTCTTTACTACTTCCTCATTTGACTGGACAGTCAAACTGTGGTCAACCAAACATAACAAGCACCTCTATTCTTTTGAAGACAATGCAGACTATGTGTATGATGTCATGTGGTCTCCAGTGCATCCAGCGCTCTTTGCTACAGTCGATGGGAATGGTCGCCTGGACCTCTGGAATCTCAACAACTACACAGAGGTGCCATCGGCAAGTGTGACCGTGGAGGGAGGATGTGCCCTGAACCAGGTCAGATGGGCATCAGGGGGCAGAGAGGTGGCAGTGGGTGATTCAGAGGGCCGTGTTTGGATCTATGATGTGGGAGAGCAGTTGGCCGTGCCACATATAGATGACTGGAGCAAATTTGCCCGTACGCTCATGGAGATTCGTGCAAACCGAGGGGATGGAGAGGAAGAAGGTGCGTTGGAGCTGCCTGCCTGAGACAGACCCAAATACATTCAGTGAGAAACAAGTAAAGATACGCTGAAACAGATGCTTGATGTAAGTCAGTGAATCACGCATCCACGCTGCTGTGATCGCAGGTTTTTTTTATTTTGCCTACAAAAGTCTATTTATAGCATGGGTGTTAATTAGCAATAACTCCTGTTCCAGTGCTAATAGTTAATTCCAGAACACACACACAGGTGAAGAAATGAATGAGCTTGAGCTAATGTATATCTATGGCTTGCAGTGACTATAATAGGAGTGAGCCTGTGATCATACTGTATCATACTGAATGACAATGTCAACTTATTTTACAAATGTGAAAGTACAGGGTCATGTTGAGATACATGGAGAATGTATTGACCATTATGTAAAAATGTATTGTAGCAAAGCTTATGAATGTGACTTTCTTTGACCTTTAACGTTGTATGTGTGTATAATTTAATACCAACTGGAGCATAAAAGCAACTGTAAAGTGTGAACTTACA

Function

symbol description
dync1i1 Predicted to enable dynein heavy chain binding activity and dynein light chain binding activity. Predicted to be involved in transport along microtubule. Predicted to be part of cytoplasmic dynein complex. Orthologous to human DYNC1I1 (dynein cytoplasmic 1 intermediate chain 1).

GO:

id name namespace
GO:0007018 microtubule-based movement biological_process

KEGG:

id description
K10415 DYNC1I, DNCI; dynein intermediate chain, cytosolic

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_05820700_05833750.mRNA True 2599 mRNA 0.46 16 5820467 5834241

Neighbor

gene id symbol gene type direction distance location
CI01000027_05807381_05817636 TBC1D31 coding upstream 2802 5807029 ~ 5817665 (+)
CI01000027_05805062_05805690 NA coding upstream 14444 5805062 ~ 5806023 (+)
CI01000027_05789308_05795504 FBXO32 coding upstream 24408 5789156 ~ 5796059 (+)
CI01000027_05781043_05784234 KLHL38B coding upstream 36052 5780606 ~ 5784415 (+)
CI01000027_05757143_05758496 NA coding upstream 61586 5756982 ~ 5758881 (+)
CI01000027_05836494_05847115 NA coding downstream 2253 5836494 ~ 5847601 (+)
CI01000027_05882855_05906234 JARID2A coding downstream 48614 5882855 ~ 5906234 (+)
CI01000027_05931114_05936800 MYLIPB coding downstream 96873 5931114 ~ 5936957 (+)
CI01000027_05981521_05983935 ZHX2, ZHX2A coding downstream 147115 5981356 ~ 5984703 (+)
CI01000027_05994575_05998236 NSMCE2 coding downstream 160334 5994575 ~ 5998353 (+)
G140894 NA non-coding upstream 67092 5750231 ~ 5753375 (+)
G140858 NA non-coding upstream 139008 5619656 ~ 5681459 (+)
G140946 NA non-coding upstream 210289 5609873 ~ 5610178 (+)
G140920 NA non-coding upstream 212352 5602529 ~ 5608115 (+)
G140929 NA non-coding upstream 252814 5566567 ~ 5567653 (+)
G140869 NA non-coding downstream 72555 5906796 ~ 5911149 (+)
G140893 NA non-coding downstream 124048 5958289 ~ 5959908 (+)
G140875 NA non-coding downstream 179448 6013689 ~ 6017411 (+)
G140889 NA non-coding downstream 331519 6165760 ~ 6170544 (+)
G141011 NA non-coding downstream 362922 6197163 ~ 6199521 (+)
G140862 NA other upstream 99702 5712612 ~ 5712702 (+)
CI01000027_05071693_05072917 NA other upstream 747331 5071693 ~ 5073136 (+)
CI01000027_05069310_05070638 NA other upstream 749599 5067917 ~ 5070868 (+)
CI01000027_05050310_05055447 NA other upstream 764528 5050310 ~ 5055755 (+)
G140924 NA other downstream 128965 5963206 ~ 5965326 (+)
G141052 NA other downstream 437126 6271367 ~ 6271600 (+)
CI01000027_06706050_06708485 NA other downstream 872136 6705983 ~ 6708513 (+)
G141082 NA other downstream 1064170 6898411 ~ 6900923 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other downstream 1118705 6951132 ~ 6957767 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_009936 dync1i1 coding NC_007127.7 CM002900.2 25316973 ~ 25337834 (+)