CI01000027_05981521_05983935 (ZHX2, ZHX2A)


Basic Information

Item Value
gene id CI01000027_05981521_05983935
gene name ZHX2, ZHX2A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 5981356 ~ 5984703 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_05981521_05983935.mRNA
TTTTAAATAGACTCTGTGGTCTGGGATGAAGTCTCATGAAGTCTTCCATTGGAGCTGACATTCACAGTCAGCTGAATCATCCTTTACCGATCCTCCACCAGACAAAGACCTGCCCATTGCTCATCACCAGAGTCCCCCTGCACTGTACCGTCTTACTCCCTGACCATGGCTAGTCGAAGAAAGTCTACAACTCCCTGCATGATCCGACCGGATGACTTGGTGACTGCAGACGATCCAGAAGATATGGATTCTTGTGTGGATGGTACAGAAGAGAATGGATCATCACATGTGTCTTCTAGTGAGGACTGGACAGATAGGAAGAGTTCTGTGAACTCTATGCAGGAAGCAACAGAGCTGGAGAAACCTGAAGTGAAAACACGACCACAGAGGAAACTCCAGGGAGGCTACGAGTGCAAATACTGTCCCTTTTCCACACAAAACCTCAACGAGTTCAAAGACCATGTTGATTCCAACCACCCCAATGTTATACTCAACCCACTTTACTTGTGTGCGGTATGCAACTTCAACACAAAAAAGTTTGATTCTTTGACAGAACACAATGAGAAATGCCATCCCGGGGAGAGCAACTTCAAGTTCAAGAGAATCAAACTAAACAGTCAGACCATTCTAGAACAGACAATCGAAGGTTCAAACTGTGCAGTCATCTATGATACAACCAGCCCTCAGTCAGGAGAGGACTTTACTGCTTTTCCTTCAAGCAAATCCACTACTGTTAAGCTGGGCAAGTCCAAAGCAGACAGTTTACGGTTGCAAGATGATAGTCCGCTGGACAAACTCGCTCAAGATCTCCCGAAAAAGCAAATTACTGCAGTGAATGTGAATGGGACTGTGATAATCCCAGATGCAACTCTTAAAGACGGCCTCTCTCATATAATGCCATCCCTGCAACGCCCACCTAACTACAACTTAGTACCAAAAATCGCCGTCCCCTTGAACACTTCAAAATACAACCCCTCATTAGATGGCAACTTGACCCTCATCACCTCCTTCAACAAGTTTCCATACCCTACTCAAGCAGAGCTCTCTTGGCTCACTGCAGCCTCCAAACACCCCGAAGAACAAATTAAAGTGTGGTTCACTACCCAACGGCTAAAACAAGGTATCAGCTGGTCTCCTGAGGAAGTTGAGGAAGCACGAAAGAAAATGTTCAATGGAACGATTCAGCCTGTTCAACAAGCATTCACTGTCTTACCTGCTCAGTTAGCTCAGTCCACTAAAGCTTCACAGCCCCTTATCCAGACCGTCCCTTGCCATGTGCTTGGACAATCTGGCCTAGTGTTGGCACCAGTTGCCAATGGCTCAAATGCGACCAGTTCTCCTCTCGCACTAACAGTCGCAAATCAAATAGCACAGGGTGTCAAGAGGCCCCACACAGCACCACTGGTTGCCCCAGAGATAAAGAGGCCTTCAATAATCCAGTCCGTTCAGAGTACTCCGAAATCTGTCTCTCCGACACCAAGTCTTTCTTCAGATTGTGAGAAAACCCCTGATCAGATCAGAGAGCTGACCACAAGCTATGCTCAGTGCCAGTTTCCTGATGATGAAGAAGTGTATCGTCTCATTGAGACGACTGGCCTCTCCTGGGGAGAGATCAAAAAATGGTTCAGCGATCAGCGCCATGGAAACCATAAGGCAGTGCAACAGATTAAAACAGACTTCTCTTCAAAGGACAGCCAACCACATAAGCCTGTCGCCACACAGTTTCCACTACTAGAGAGAGTTAAAGGCAAATCCTCTGAGCAAATGAAAAAGTTAGAGGAGAGTTTCCAAAGGACTAGCTTTCCGACCCAGGCTGAGATAGAGCACCTTGTGGCGGACACCAGGCTCTCCAAAAACGAAATCGATTGCTGGTTTACGGAGCGTCGTGCACTACGTGACAACCTAGAGCAAGCCTTGCTCAACTCGATGGGCTCGAAAAGGCTGGAGCATCACCTTCAAAGGGGGACATTGAATGGAGTCCATGAGCAGGACAGCAGAGTCAGGGACTCACCTCTTCCCATTCTCACATCCTCAGTGTGTCCAGAGGCCATTGATGGCAAGTCTCTCTGCCTTCTTAAAGACGTGTTTGCACAAACCCAGTGGCCCTCACCGGAGGAGTACAGCCAACTAGAAATCCAAACAGGGCTAGCTCGTACAGAAATTGTCCGCTGGTTTAAGGACAACAGATCTGCTCTGAAGAATGGAACTTTGGATTGGATGGAGCAATTTCAAAGTCTTAGCAACAAAAGACCGAATGGACAAAACAGCTTGTTGATCACGGATCAGACACAGAGCGTCCTACAAAGGCACTTTCAAGAGGCAAAGGTACAAAAAGGGGAGGGTTTTGAGAAGCTTGCAGAGCAGCCAAAACTAACCAACCAGGACATAGTAGAATGGTTCACCAGTAAACTGGGCCACAACATGCCTGATATCAGCAAGAGCAAGGAACATGGACAGGCAAGTGTAGATGGTAAGAGGTGGGTTTCCTTGGCAGCTGACATTGACAGCAAAGACTATGATGCACAGAAAGTGCCACGAGACCTTGAAGTGCTGTCAGCAGAACACAGAGTGACGGGATGAAGTTGTAAAGGTAATAGTCTTATTTTATTTTAACTAGCTGGTTGAAGTTTTGAATGAAGAAGGAGCAAGAGAGTTGCTTTCCCAGAGTAATAGCTGCTTCTCGTGATAATGTAGCAGATGTGGCTGCAAGACACCCAGGATGTCGGCAGTCTGTAATTTAGCCTTTAGAAAAACAGCTTAGCAGTGAGCGAGAGAGCAGAACCCAAATTTTGTGCAAGTTGGAAAGGGGGCAGTGAGTCAATTTTCTGTTTTCTTTCAAGCCTCCATCCATAATTTATGTGAGTCAAGTGGCATTTGTTGCTTGTTCTGTTGCAGAAGAAAACGGGCTGCTATGACTGAACTAGATGGGCCTGATGATTAAGGAATGACCTTTGTCGTCGTGTATGGAACCAATGATCTCATATCTGGACTCTGAAGTTATCAGAGACAAGATGGACTGGGAGCATCTGTGAAACACTGTCCGGAGTGACCATGGAGTGCCAAAGTTTGACTGCTTTGTTGTTATGTGTTTGTTTTTTTTAAAAGGGCCCTTGTAAATATTTTTTCTGTACTTCAACAGATTTGTAAAATTTTTTGGAGATGAGACTTTTGTTACATTTATAATAGGAGTCCCAAGACATTTCCCTTGACCCTTATAATGGAATGTTCAATCATTTTTGTGAGGACACAAAACCAACCCACCTGCTGGTGAAGCTGTTATAAAACACAGTGTGGTCCATGATGGCACTTAATATTTCAAGTGGACACACACACACAAGCGGTGCTTCA

Function

symbol description
zhx2a Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to human ZHX2 (zinc fingers and homeoboxes 2).
zhx2 Enables protein heterodimerization activity and protein homodimerization activity. Involved in negative regulation of transcription by RNA polymerase II. Located in cytosol and nucleoplasm. Is active in nucleus.

GO:

id name namespace
GO:0000122 negative regulation of transcription by RNA polymerase II biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_05981521_05983935.mRNA True 3348 mRNA 0.46 1 5981356 5984703

Neighbor

gene id symbol gene type direction distance location
CI01000027_05931114_05936800 MYLIPB coding upstream 44399 5931114 ~ 5936957 (+)
CI01000027_05882855_05906234 JARID2A coding upstream 75122 5882855 ~ 5906234 (+)
CI01000027_05836494_05847115 NA coding upstream 133755 5836494 ~ 5847601 (+)
CI01000027_05820700_05833750 DYNC1I1 coding upstream 147115 5820467 ~ 5834241 (+)
CI01000027_05807381_05817636 TBC1D31 coding upstream 163691 5807029 ~ 5817665 (+)
CI01000027_05994575_05998236 NSMCE2 coding downstream 9872 5994575 ~ 5998353 (+)
CI01000027_06042239_06051165 CBLC coding downstream 56210 6040913 ~ 6051619 (+)
CI01000027_06103946_06107995 TRYPSASE, TRP-IA, PRSS59.1, PRSS59.2, TRYP, TRP-II, TRP-I coding downstream 119186 6103889 ~ 6107995 (+)
CI01000027_06108585_06112721 NA coding downstream 123882 6108585 ~ 6112755 (+)
CI01000027_06327905_06328111 NA coding downstream 343202 6327905 ~ 6328220 (+)
G140893 NA non-coding upstream 21448 5958289 ~ 5959908 (+)
G140869 NA non-coding upstream 70207 5906796 ~ 5911149 (+)
G140950 NA non-coding upstream 159025 5821810 ~ 5822331 (+)
G140894 NA non-coding upstream 227981 5750231 ~ 5753375 (+)
G140858 NA non-coding upstream 299897 5619656 ~ 5681459 (+)
G140875 NA non-coding downstream 28986 6013689 ~ 6017411 (+)
G140889 NA non-coding downstream 181057 6165760 ~ 6170544 (+)
G141011 NA non-coding downstream 212460 6197163 ~ 6199521 (+)
G141023 NA non-coding downstream 237030 6221733 ~ 6223809 (+)
G141029 NA non-coding downstream 255053 6239756 ~ 6239955 (+)
G140924 NA other upstream 16030 5963206 ~ 5965326 (+)
CI01000027_05757143_05758496 NA other upstream 222486 5756982 ~ 5758881 (+)
G140862 NA other upstream 260591 5712612 ~ 5712702 (+)
CI01000027_05071693_05072917 NA other upstream 908220 5071693 ~ 5073136 (+)
CI01000027_05069310_05070638 NA other upstream 910488 5067917 ~ 5070868 (+)
G141052 NA other downstream 286664 6271367 ~ 6271600 (+)
CI01000027_06706050_06708485 NA other downstream 721674 6705983 ~ 6708513 (+)
G141082 NA other downstream 913708 6898411 ~ 6900923 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other downstream 968243 6951132 ~ 6957767 (+)
CI01000027_07469157_07471720 NA other downstream 1484041 7468964 ~ 7471999 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_009944 zhx2a coding NC_007127.7 CM002900.2 25608778 ~ 25643226 (+)