CI01000027_06042239_06051165 (CBLC)


Basic Information

Item Value
gene id CI01000027_06042239_06051165
gene name CBLC
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 6040913 ~ 6051619 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_06042239_06051165.mRNA
CTATATATTGAAGATATATTTAACATCATATCATGAAGAGTCTTATCAACATGGTATTAGTTTTAATGTTAATTAATTTATGTCATTTTAAGGCCAGCCCTACAAAAGCAAAGAAACTCTATCACTCCCTCCCTTCTATAGTCTTTTGTTATGTATTCAGGAAGTTGTTCACACATGGTCTGTCCAATACGTCACAATTCAAACAGCGTCCCAACTGCACACAGCCCGTGCTACACAGCTCACTCACAGGCACAAAAGAAAACAAACCTGTTTGTCTGCCTCTTAGCTACCCGGAAACTGATCAGAGAGAGAGAGAGAGAGAGAGGTGAATGTCTTGAGTTCCTGTCCGCAACCAACATGAGTGTAAGTGCCTCTTCAAAATTTTGGACACAGAGATACAATCAGACAGATTGAGAGACACCATATGGATGAGAGAGATAATGACTGAGCAAGAGCACTAAATGGCTGTGTGGGTGGAGTGACGTTGCAGGAGGCCGGTAGATCTGAGAGCAAAAATTAGTATCTGAAGAATTCATGTTTTAGGGTTTCGTTTAGCTTGTTCGCAACATCTTTGTAATGGAGAAATGTCAAAAGGACACCTGAACTTTGGAGCTTTTTTTTCCTCTAGAGCAATAGCATATTTTTTGACGACATCTGGAACCAACCTGCATACTTTTCGTAAGGTGTTGCAGGTGTGTTGTTTGAATAAGTGAGCTCTTCTTGTTCTGCTTGTGAAGCATCTGTATCCCTCAGTAGCAATGGTGACAAACATCTCTCGTCACTTCGTCGCCTTTGACCTGATCTGTGGACCTTGATATGGACAATTCAAGATTTTTCAACTGGATTATAGAACAAAGTTTTGCAGTGGTAAGATGACAATTAATTTCGAAATCATTACAATTACAGACATTTTTAAACCACTGTTTCATCATTATATCATCAACATCAGTGATAACAAGACAAAGAGTTACCTGGGAAGTGGTTTTCAGATGCACGCTACCTAAAAATAGATATCTTTTCTGAGAATAATGGGACAAACTAACCACTTGTTATTGTATCTGACAATTTGATAAGTTATAGGCTCAGAGGTTTTCATCTTTTCATGCTAGCTCTGCTAAAAACGATGCTCTCCATAGACTCAACCGATCATCAATTGTTGTATCATGCATACAAGAGGACAACTGAATCGAATAGACCTTAATTGTGTGAAGGAAGTGAGTGGATTCAACACTATCTTAGACAACTGTTGATTCAGACTCTTGTCTGAACATTAACATAGGCTGGCTAGCACTCCACGTGTGACTCATTGGATACAACTCATCTATGATGGCAACAGCTAGGCGTTCAGGGCCTGCAGGCCGAACTCAAATTCTTGATGCTTCTCAATCTATGTCCCAGTCCCCCACCAGTGCGGACCGTAAACTTCTTGATAAAGTTTTCAAGAGACTGGACAAACTGCATAAACTGAGCACCGACCCCAGGCTGGGTCTAAAAAACAGTCCGCCGTACCTCCCCGAGCTGGTGTCGGAGACGGCCATCCACCTGACAGAAGTATGGGCTCCCTACCGGGGGTCAATGATGGCCGTGCCACGAGGGGACGAGGGTGATTATCTGAGGATCCATATTCGACACTTGCTGGACAAGACAGATAGAGCTGTGCTGCTGTTCAAAGATGGCAAGGAGAAGATGTTTGAAGAGACATCAAGCTACAGCCACATGTTGAACGAACTACGAACTCTGTTTCCTGGGGGACGATTTCAGGGTGATACTTATAGAGTTACAAAGACAGAGGCCAAAGATTTCTGGAGGAAGGCTTTTGGACACAAGTGTATAGTGCAGTGGAACATTTTTAAACAGCAGTTGAGGAAGGTTCATTACTTCGAAGAGGGAATGGAGGCCATGGCTTTGAAGTCCACAGTTGATCTCACTTGTAACGATCATATATCCATCTTTGAGTTTGATATTTTCACCAGGCTTTTTCAGCCCTGGTCAACTTTGATAAGGAACTGGAATCACTTAGCAGTAACTCACCCTGGATACATGGCGTTTCTCACCTACGACCAGGTCCGGGTTCGACTGGAGCACTACAGACATCGTCCTGGCAGCTACATCTTTCGTCTCAGTTGCACACAAATGGGTCAGTGGGCGATTGGTCACGTGACCAGTGATGGCAGCATCGTGCAAACCATTCCCCAGAATACACCTCTCTACCAAGCACTCATACAAGGTTTCAGGGAGGGCTGCTACTTATACCCCGATGGACGTGATGTGAACCCTGACCTCACCAGCCTGTGCAGTCCAGCTAACAAGGGTCGAGTCAAAGTCACAGAGGAGCAATATGAATTATACTGTGAGATTGGCAGCACATTTCAGCTCTGCAAAATCTGCACAGAACGAGACAAGGACACTCGCATTCAGCCCTGTGGGCATCTGCTGTGTCAGCCCTGCTTGACTGGCTGGCAGAAGTCAGATGGACACACATGTCCCTACTGCCGCTGTGACATCAGAGGCACGGAGTCCATCCTCATTGAGCCCTACCTGCCAGCGAGAGCCAGGAGGGCAGGGGGGAATGAGGAAGAGGATGAAGATGAAGATGAAGATGACGAGGATGATCATGAGGATGTAGAGCTGGTAATGAAAAAACTGGCTTGTATGAAAAAGGCCCGAACGGGCTGGCCCACACTGGGTCATCATAGGCTTAATGTGGGCAGTCCGCTAGTGTGGGCTGCTCACAGAGACTCCACAGTGAGCCCAAAGCCTTGCCTGGGCAAGCCCACACTGTGCCTATTTAGGTTTGGTGTGGGCTGGCCCTAGCCCACTGTGCCCGCAAAAAGCCAGCATGGGCCCCGCAGGGGTATTTTTGCAGGGAAAGTTACTTATATTCAGTAGAATGTCTGTTGGGAGAAATATTATCAAAATAAAGTGTTAGCAGATAGTAAGCAGACAGTCTACTAATACTCTAATGACAGTTAGTTGACATATAGTTGCAAAGTTACTTAGTAGAATGTCTAAAGTTGACCATCCAGATAAAGTATTAACACTTTTGCTTGCCAATCTGAAACCTACATCCTTACTGAATTTTATGACTGCTTACATTATCTAGAGTTTATTGAATATTTCACGCGACTTTACCCTTATATGTTTACTCATATGTTCTTTGTTTGCATTGTTTGCATTTTTGTATTATATTTGTATTATCAACCACATTCACACAAAACGCCAAGACCTCTAGATCTCACACTGTTCTTTCAATCAAAATGCATTCACA

Function

symbol description
cblc Predicted to enable SH3 domain binding activity; receptor tyrosine kinase binding activity; and ubiquitin protein ligase activity. Predicted to be involved in negative regulation of epidermal growth factor-activated receptor activity and signal transduction. Predicted to act upstream of or within cell surface receptor signaling pathway and regulation of signaling. Predicted to be located in cytoplasm. Predicted to be active in membrane raft and plasma membrane. Orthologous to human CBLC (Cbl proto-oncogene C).

GO:

id name namespace
GO:0004871 obsolete signal transducer activity molecular_function

KEGG:

id description
K04707 CBL; E3 ubiquitin-protein ligase CBL

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_06042239_06051165.mRNA True 3268 mRNA 0.44 9 6040913 6051619

Neighbor

gene id symbol gene type direction distance location
CI01000027_05994575_05998236 NSMCE2 coding upstream 42560 5994575 ~ 5998353 (+)
CI01000027_05981521_05983935 ZHX2, ZHX2A coding upstream 56210 5981356 ~ 5984703 (+)
CI01000027_05931114_05936800 MYLIPB coding upstream 103956 5931114 ~ 5936957 (+)
CI01000027_05882855_05906234 JARID2A coding upstream 134679 5882855 ~ 5906234 (+)
CI01000027_05836494_05847115 NA coding upstream 193312 5836494 ~ 5847601 (+)
CI01000027_06103946_06107995 TRYPSASE, TRP-IA, PRSS59.1, PRSS59.2, TRYP, TRP-II, TRP-I coding downstream 52270 6103889 ~ 6107995 (+)
CI01000027_06108585_06112721 NA coding downstream 56966 6108585 ~ 6112755 (+)
CI01000027_06327905_06328111 NA coding downstream 276286 6327905 ~ 6328220 (+)
CI01000027_06329025_06333271 NA coding downstream 277100 6328719 ~ 6333336 (+)
CI01000027_06335278_06348176 NA coding downstream 283541 6335160 ~ 6348853 (+)
G140875 NA non-coding upstream 23502 6013689 ~ 6017411 (+)
G140893 NA non-coding upstream 81005 5958289 ~ 5959908 (+)
G140869 NA non-coding upstream 129764 5906796 ~ 5911149 (+)
G140950 NA non-coding upstream 218582 5821810 ~ 5822331 (+)
G140894 NA non-coding upstream 287538 5750231 ~ 5753375 (+)
G140889 NA non-coding downstream 114141 6165760 ~ 6170544 (+)
G141011 NA non-coding downstream 145544 6197163 ~ 6199521 (+)
G141023 NA non-coding downstream 170114 6221733 ~ 6223809 (+)
G141029 NA non-coding downstream 188137 6239756 ~ 6239955 (+)
G141048 NA non-coding downstream 198209 6249828 ~ 6250070 (+)
G140924 NA other upstream 75587 5963206 ~ 5965326 (+)
CI01000027_05757143_05758496 NA other upstream 282043 5756982 ~ 5758881 (+)
G140862 NA other upstream 320148 5712612 ~ 5712702 (+)
CI01000027_05071693_05072917 NA other upstream 967777 5071693 ~ 5073136 (+)
CI01000027_05069310_05070638 NA other upstream 970045 5067917 ~ 5070868 (+)
G141052 NA other downstream 219748 6271367 ~ 6271600 (+)
CI01000027_06706050_06708485 NA other downstream 654758 6705983 ~ 6708513 (+)
G141082 NA other downstream 846792 6898411 ~ 6900923 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other downstream 901327 6951132 ~ 6957767 (+)
CI01000027_07469157_07471720 NA other downstream 1417125 7468964 ~ 7471999 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_009946 cblc coding NC_007127.7 CM002900.2 25761101 ~ 25800819 (+)