G141029


Basic Information

Item Value
gene id G141029
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 6239756 ~ 6239955 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU160266
GTTGAAAACAGTTGTGCTGCTTAATATTTTTGTGGAAGCCCTGATACATTTCTTTCAGGATTCTTTGATGAATAGAAAGTTCAAAAGAACTGCATTTATTTAAAATTGATTTTTTGTAACAGTGTAAAAGTCTTTACTGTGACTTTTAATCAATTTAATTTATAAAAAAAAAGAAAAAAAAAAAAGACTGAATCTTGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160266 True 200 lncRNA 0.25 1 6239756 6239955

Neighbor

gene id symbol gene type direction distance location
CI01000027_06108585_06112721 NA coding upstream 127001 6108585 ~ 6112755 (+)
CI01000027_06103946_06107995 TRYPSASE, TRP-IA, PRSS59.1, PRSS59.2, TRYP, TRP-II, TRP-I coding upstream 131761 6103889 ~ 6107995 (+)
CI01000027_06042239_06051165 CBLC coding upstream 188137 6040913 ~ 6051619 (+)
CI01000027_05994575_05998236 NSMCE2 coding upstream 241403 5994575 ~ 5998353 (+)
CI01000027_05981521_05983935 ZHX2, ZHX2A coding upstream 255053 5981356 ~ 5984703 (+)
CI01000027_06327905_06328111 NA coding downstream 87950 6327905 ~ 6328220 (+)
CI01000027_06329025_06333271 NA coding downstream 88764 6328719 ~ 6333336 (+)
CI01000027_06335278_06348176 NA coding downstream 95205 6335160 ~ 6348853 (+)
CI01000027_06392269_06407773 PTPN3 coding downstream 151803 6391758 ~ 6407840 (+)
CI01000027_06410011_06426230 EPB41L4B coding downstream 170056 6410011 ~ 6426936 (+)
G141023 NA non-coding upstream 15947 6221733 ~ 6223809 (+)
G141011 NA non-coding upstream 40235 6197163 ~ 6199521 (+)
G140889 NA non-coding upstream 69212 6165760 ~ 6170544 (+)
G140875 NA non-coding upstream 222345 6013689 ~ 6017411 (+)
G140893 NA non-coding upstream 279848 5958289 ~ 5959908 (+)
G141048 NA non-coding downstream 9873 6249828 ~ 6250070 (+)
G141051 NA non-coding downstream 29827 6269782 ~ 6270058 (+)
G141059 NA non-coding downstream 54041 6293996 ~ 6295417 (+)
G141060 NA non-coding downstream 58398 6298353 ~ 6298578 (+)
G141037 NA non-coding downstream 59375 6299330 ~ 6299758 (+)
G140924 NA other upstream 274430 5963206 ~ 5965326 (+)
CI01000027_05757143_05758496 NA other upstream 480886 5756982 ~ 5758881 (+)
G140862 NA other upstream 518991 5712612 ~ 5712702 (+)
CI01000027_05071693_05072917 NA other upstream 1166620 5071693 ~ 5073136 (+)
CI01000027_05069310_05070638 NA other upstream 1168888 5067917 ~ 5070868 (+)
G141052 NA other downstream 31412 6271367 ~ 6271600 (+)
CI01000027_06706050_06708485 NA other downstream 466422 6705983 ~ 6708513 (+)
G141082 NA other downstream 658456 6898411 ~ 6900923 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other downstream 712991 6951132 ~ 6957767 (+)
CI01000027_07469157_07471720 NA other downstream 1228789 7468964 ~ 7471999 (+)

Expression


Co-expression Network