CI01000027_09464510_09467490 (RWDD1)


Basic Information

Item Value
gene id CI01000027_09464510_09467490
gene name RWDD1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 9464211 ~ 9467740 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_09464510_09467490.mRNA
ACATATGTTAATTTTGTATCAATTGTTTATTGTGTATACAATCTTTTTACAGCAGATTCAATGGTGTGACAGCACGAATTACAACAATTGCACTCATTTTTAACAGATCAAGTGAAATTGGGGTGTTACTCACGCCACCCAGACACAAGCTCAGACATTATTGATGATTGCAGATGACATCGATGCTGGACGGGCCTTAGCACACGTTTCTTCCATGCAGATTCTAATGTATGGACATTTGTGACATAAAATGACAGACTACGGCGAGGAGCAGAGGAATGAACTAGAAGCAATAGAGTCCATTTACCCAGACTCATTTACAGTGCTTTCCGAGAAGCCCACAAGCTTCACCATCACAGTTACTTCTGATGCGGGAGAAAATGAAGAAACGGTGGAGGTGACCCTGAAGTTTACATATGTGGAGAAATATCCAGACGAGCCCCCTCTCTGGGAGATCTTTTCACAGGAAAACCTGGAAGATTCAGACACTGAAGACATTCTAACGCTTTTGAATCAACAGGCCGAAGAAAACCTGGGAATGGTCATGATATTCACATTAGTTACAGCTGTACAGGAGAAACTTAATGAAATAGTAGACCAGATTAAGAGCAGAAGAGAAGAGGAGAAAGAACGAATAGAAAGAAAGGAAAGGGAGGCCGAAGAAGCTGAGAAGTTTGCATTCCAAGGCACTGTGGTCACAATTGAGAACTTCTTATCATGGAAAGCAAAATTTGAACAAGAAATGACAGAACTAAAGAGTAAAAGGCAGAAAGAAGAGGAGCAGTCAGGAAAGGGAAAACTCACAGGAAAACAGCTTTTTGAGACAGACCATAATCTTGACACTTCAGATATCCAGTTCTTGGAGGACGGTGGCAACAGTGTGGAAGTGGATGAGTCACTCTTCCAAGACATGGATGATTTGGACTTGGATGAGGACGACCCTGATTTCAACCCACTGGACTTGGGCAGCGATGAAGACTGAATTGTGTTAACTCTCAACCTGATATGAATGGTATAGATGCCAATATCCTCCTGTAGCAGCCTTATGGAGGCAGGACTTCAGCTCAACCGCGCTAAACACAAACTTTTCAGTCACTACTATCTATGGTGCAGCATATTTTACGAAACTGTCAAACATATTGTCATTTGTACAATTATGGCCATTAAAAACCATTGACTTGTTCTCTTATTCATATGAATGGCTTCATTTACACTAGAGTTAAGTTGACGTTTCCCAGAAATGTGGCCTGGCAGGTAGTGCAACCTAAATTTCTCAATAAA

Function

symbol description
rwdd1 Predicted to be involved in cytoplasmic translation. Predicted to be part of polysome. Orthologous to human RWDD1 (RWD domain containing 1).

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_09464510_09467490.mRNA True 1281 mRNA 0.41 7 9464211 9467740

Neighbor

gene id symbol gene type direction distance location
CI01000027_09437673_09445306 IMA5, KPNA5 coding downstream 18663 9436243 ~ 9445548 (-)
CI01000027_09401652_09408536 CNOT3, CNOT3A coding downstream 55210 9401388 ~ 9409001 (-)
CI01000027_09341489_09346178 NA coding downstream 117548 9341443 ~ 9346663 (-)
CI01000027_09332854_09337620 NA coding downstream 125035 9332734 ~ 9339176 (-)
CI01000027_09319234_09326444 STYK1 coding downstream 137424 9318811 ~ 9326787 (-)
CI01000027_09472471_09475553 NA coding upstream 4612 9472352 ~ 9476152 (-)
CI01000027_09476738_09478257 FAM26F coding upstream 8759 9476499 ~ 9478417 (-)
CI01000027_09504696_09522574 MMS22L coding upstream 36862 9504602 ~ 9522837 (-)
CI01000027_09668229_09671091 NA coding upstream 199350 9667090 ~ 9671091 (-)
CI01000027_09702760_09713076 FAXCB coding upstream 234481 9702221 ~ 9713362 (-)
G143818 NA non-coding downstream 6672 9457226 ~ 9457539 (-)
G143817 NA non-coding downstream 9318 9454235 ~ 9454893 (-)
G143694 NA non-coding downstream 39587 9423411 ~ 9424624 (-)
G143814 NA non-coding downstream 40869 9422863 ~ 9423342 (-)
CI01000027_09252655_09272284 NA non-coding downstream 206330 9252394 ~ 9273662 (-)
G143820 NA non-coding upstream 10826 9478566 ~ 9478786 (-)
G143830 NA non-coding upstream 62406 9530146 ~ 9530858 (-)
G143831 NA non-coding upstream 64076 9531816 ~ 9532071 (-)
G143833 NA non-coding upstream 68626 9536366 ~ 9536634 (-)
G143839 NA non-coding upstream 78479 9546219 ~ 9546419 (-)
G143325 NA other downstream 1578162 7884535 ~ 7886049 (-)
G143267 NA other downstream 1790442 7669329 ~ 7673769 (-)
G142299 NA other downstream 2024020 7439178 ~ 7440191 (-)
G142209 NA other downstream 2306213 7153623 ~ 7157998 (-)
G142203 NA other downstream 2321148 7141094 ~ 7143063 (-)
G144365 NA other upstream 1071040 10538780 ~ 10542148 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location