G141111


Basic Information

Item Value
gene id G141111
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 6679832 ~ 6680388 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU160355
TTTAAAATTGGGCTGAATGACTTACCTTGTATGGCAGGTCCCCAAGCAAACAGATAGTACCAGCTTAGGTGCAGGTCCACCAGCGTCTCCTCCCGTGGCACGTGAAGAGGCCGTTTGAAGCGGCAGGTGACGCGGTTGTTTTCAAAAATGCCCTCCTCGTCCCGTGCCGGGTTGCGCTTGATCTCTTTGGCCCACTGGCCCACGTTATAGAAATGATGGATCCGTACACGTCCATTATCGTCATGAACACAGCCCATGACATCATCACCTCCCCCATTTTTTTGTCAGAGGAGAAACCGACAGCAACCCATCCGTCAGTGTCTGCACTCATCTCGAATTCCACATCTGTGCCAATGCGTCTGAAACTCAGGAAGTAATCACAGGTCTCTGCGTCACAGCCCGGTTTGCCATATCTACAGCAACAGAAAGATTAAGAGTGAGACAAATAAATTGAGGCACTTAAAATGTGGCCAGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160355 True 476 lncRNA 0.50 2 6679832 6680388

Neighbor

gene id symbol gene type direction distance location
CI01000027_06604099_06652019 GALNT1 coding upstream 27644 6604099 ~ 6652188 (+)
CI01000027_06504915_06514535 NA coding upstream 164682 6504311 ~ 6515150 (+)
CI01000027_06495825_06497691 GEM coding upstream 181754 6495351 ~ 6498078 (+)
CI01000027_06477695_06489968 RAD54B coding upstream 189799 6477695 ~ 6490033 (+)
CI01000027_06470650_06470837 NA coding upstream 208844 6470650 ~ 6470988 (+)
CI01000027_06706050_06708485 NA coding downstream 25595 6705983 ~ 6708513 (+)
CI01000027_06785671_06803146 NR4A3 coding downstream 105283 6785671 ~ 6803213 (+)
CI01000027_06811768_06817052 NA coding downstream 130706 6811094 ~ 6817163 (+)
CI01000027_06859191_06877582 NA coding downstream 178803 6859191 ~ 6877625 (+)
CI01000027_06906104_06909909 NA coding downstream 225716 6906104 ~ 6910164 (+)
G141106 NA non-coding upstream 12842 6664015 ~ 6666990 (+)
G141147 NA non-coding upstream 143240 6536377 ~ 6536592 (+)
G141146 NA non-coding upstream 145509 6534084 ~ 6534323 (+)
G141145 NA non-coding upstream 149014 6530592 ~ 6530818 (+)
G141160 NA non-coding downstream 13890 6694278 ~ 6694549 (+)
G141166 NA non-coding downstream 41116 6721504 ~ 6721759 (+)
G141170 NA non-coding downstream 50086 6730474 ~ 6730733 (+)
G141177 NA non-coding downstream 61582 6741970 ~ 6742199 (+)
G141182 NA non-coding downstream 73508 6753896 ~ 6754108 (+)
G141052 NA other upstream 408232 6271367 ~ 6271600 (+)
G140924 NA other upstream 714506 5963206 ~ 5965326 (+)
CI01000027_05757143_05758496 NA other upstream 920962 5756982 ~ 5758881 (+)
G140862 NA other upstream 959067 5712612 ~ 5712702 (+)
CI01000027_05071693_05072917 NA other upstream 1606696 5071693 ~ 5073136 (+)
G141082 NA other downstream 218023 6898411 ~ 6900923 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other downstream 272558 6951132 ~ 6957767 (+)
CI01000027_07469157_07471720 NA other downstream 788356 7468964 ~ 7471999 (+)
CI01000027_07947743_07951397 NA other downstream 1270315 7947657 ~ 7951942 (+)

Expression


Co-expression Network