G141170


Basic Information

Item Value
gene id G141170
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 6730474 ~ 6730733 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU160420
GTTTTCTTTAGGGTTCAGGTCAGGGAGCTGGGATGGCCATGGCAGAAGCTTCATTTTGTGCTCAGTGACACATTTTTGTGTTGGTTTTGATGTTTGTTTTGGATCATTGTCCTGATGGACGATCCAACCATGGCCCATTATTGGATTTCTAGCAGAAGCGGTCAGGTTTTTATTTTTTTATCTGTTGGTATTTGATAGAATTCATGATGCCATGTATCTGAACAAGATGTCCAGGACCTCCAGCAGAAAAATAGGCCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160420 True 260 lncRNA 0.42 1 6730474 6730733

Neighbor

gene id symbol gene type direction distance location
CI01000027_06706050_06708485 NA coding upstream 21961 6705983 ~ 6708513 (+)
CI01000027_06604099_06652019 GALNT1 coding upstream 78286 6604099 ~ 6652188 (+)
CI01000027_06504915_06514535 NA coding upstream 215324 6504311 ~ 6515150 (+)
CI01000027_06495825_06497691 GEM coding upstream 232396 6495351 ~ 6498078 (+)
CI01000027_06477695_06489968 RAD54B coding upstream 240441 6477695 ~ 6490033 (+)
CI01000027_06785671_06803146 NR4A3 coding downstream 54938 6785671 ~ 6803213 (+)
CI01000027_06811768_06817052 NA coding downstream 80361 6811094 ~ 6817163 (+)
CI01000027_06859191_06877582 NA coding downstream 128458 6859191 ~ 6877625 (+)
CI01000027_06906104_06909909 NA coding downstream 175371 6906104 ~ 6910164 (+)
CI01000027_06915303_06927001 TMEM67 coding downstream 184570 6915303 ~ 6927308 (+)
G141166 NA non-coding upstream 8715 6721504 ~ 6721759 (+)
G141160 NA non-coding upstream 35925 6694278 ~ 6694549 (+)
G141111 NA non-coding upstream 50086 6679832 ~ 6680388 (+)
G141106 NA non-coding upstream 63484 6664015 ~ 6666990 (+)
G141177 NA non-coding downstream 11237 6741970 ~ 6742199 (+)
G141182 NA non-coding downstream 23163 6753896 ~ 6754108 (+)
G141183 NA non-coding downstream 24844 6755577 ~ 6755863 (+)
G141187 NA non-coding downstream 33615 6764348 ~ 6764556 (+)
G141197 NA non-coding downstream 47482 6778215 ~ 6778496 (+)
G141052 NA other upstream 458874 6271367 ~ 6271600 (+)
G140924 NA other upstream 765148 5963206 ~ 5965326 (+)
CI01000027_05757143_05758496 NA other upstream 971604 5756982 ~ 5758881 (+)
G140862 NA other upstream 1009709 5712612 ~ 5712702 (+)
G141082 NA other downstream 167678 6898411 ~ 6900923 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other downstream 222213 6951132 ~ 6957767 (+)
CI01000027_07469157_07471720 NA other downstream 738011 7468964 ~ 7471999 (+)
CI01000027_07947743_07951397 NA other downstream 1219970 7947657 ~ 7951942 (+)
CI01000027_08026500_08029412 ENSAB, ENSA other downstream 1295664 8025788 ~ 8032041 (+)

Expression


Co-expression Network