CI01000028_08769236_08770237


Basic Information

Item Value
gene id CI01000028_08769236_08770237
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 8769236 ~ 8770237 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000028_08769236_08770237.mRNA
CAAGTGGTAGTGCCAGAGAAGTATCGTTCAGTTGTGTTGAAGATTTCTCATGATGAACTTGCAGGCCATTTAGGGGATAAAAAGACCTATGACAGAATACTTAGTCACTTTTTTTTTTTGCCAAAGTTGAAGAAGGATGTGTCAAAGTCTATCAAGACATGTCATACTTGTCAATTAATAGGCAAGCCAAATCAGAAGATCAAGCCTGCTCCATTGTTTCCTATTCCTGCTGTCAGTCCACCATTTGGGCATCTGATTATTGACTGTGTAGGTCCGTTGCCGAGATCAAAATCAGGTAGTATTTATTTGCTCACTATTATGTGAGCATCGACTCGGTACCCTGCGGCCTATCCCCTCCGTACGATCACTGCAAAATCAGTGGTGAAAGCCTTGACTCAGTTCATTTCCGTTTTTGGTATTCCGAAGATTGTGCAAAGTGGTCAAGGTACTAATTTTACCTCTTACTTGTTTTCTCAGGTCTTGAAGCTGTTACACATTAAGCACAATAAAGCTAGTGCTTATCATGCCCAAAGCCAGGGGGCTTTGGAGCGTTTCCATCAGACGCTTGAGTCCTTACTGCAGGCGTATTGTACGGAGATGGAAGGTGATTGGGAGGAGGGATTGCCGTGGTTAATGTTGTCAGCGCATGAGGTATGTCAGGAAAGTACTGGGTTCAGTCCCAATGATTTGGTGTTTGGACACACCGTTCGGGGACCACTGGCTGTGCTTCGTGATAACTGGACTGAGAGTACACCACCTAAAAATTTGATAAGTTATGTGAATGACTTTAAGCGTAGATTGTATGAAGCCGTTAAGATGGCAAAAGAACAATTGAATTCTTCACAGAAGCGTATGAAGTCACTTTATGATAGGCGAACCGAGAAACAACAATTTATGCCAGGCGATCAAGTGTTGGCTCTATTACCTGTAGAAAGCTCACTATTTCAAGCTCAGTATACTGGTCCTTTTGTAGTAGCAAAGCAAGTTACTGATTTAAACCAC

Function

NR:

description
LReO_3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000028_08769236_08770237.mRNA True 1002 mRNA 0.43 1 8769236 8770237

Neighbor

gene id symbol gene type direction distance location
CI01000028_08717545_08739805 PPFIBP2A coding upstream 28437 8717545 ~ 8740799 (+)
CI01000028_08595383_08629444 SYT9, SYT9A coding upstream 139708 8595321 ~ 8629528 (+)
CI01000028_08302370_08504940 SPON1, SPON1A coding upstream 264296 8302247 ~ 8504940 (+)
CI01000028_08172067_08174791 NA coding upstream 594422 8167516 ~ 8174814 (+)
CI01000028_08134368_08134658 NA coding upstream 634546 8134368 ~ 8134690 (+)
CI01000028_08771015_08787659 NA coding downstream 543 8770780 ~ 8787906 (+)
CI01000028_08899947_08900924 MAF coding downstream 129293 8899530 ~ 8900955 (+)
CI01000028_09008686_09011637 NA coding downstream 236163 9006400 ~ 9011804 (+)
CI01000028_09071285_09094934 NA coding downstream 300712 9070949 ~ 9094984 (+)
CI01000028_09237132_09261831 NA coding downstream 466685 9236922 ~ 9261991 (+)
G150374 NA non-coding upstream 11405 8757548 ~ 8757831 (+)
G150364 NA non-coding upstream 23420 8745507 ~ 8745816 (+)
G150331 NA non-coding upstream 71796 8697213 ~ 8697440 (+)
G150325 NA non-coding upstream 76934 8692101 ~ 8692302 (+)
G150148 NA non-coding upstream 84386 8684391 ~ 8684850 (+)
G150424 NA non-coding downstream 98115 8868352 ~ 8868687 (+)
G150425 NA non-coding downstream 99048 8869285 ~ 8869822 (+)
G150426 NA non-coding downstream 106972 8877209 ~ 8877493 (+)
G150427 NA non-coding downstream 107359 8877596 ~ 8877823 (+)
G150406 NA non-coding downstream 128845 8899082 ~ 8902611 (+)
CI01000028_07470324_07471346 NA other upstream 1298536 7469543 ~ 7471432 (+)
G147693 NA other upstream 3315626 5440454 ~ 5453610 (+)
G147636 NA other upstream 3552625 5216090 ~ 5216611 (+)
G147462 NA other upstream 3779398 4958703 ~ 4989838 (+)
G150398 NA other downstream 21498 8791735 ~ 8792120 (+)
CI01000028_09661097_09682326 NA other downstream 902890 9660747 ~ 9684876 (+)

Expression


Co-expression Network