CI01000028_08899947_08900924 (MAF)


Basic Information

Item Value
gene id CI01000028_08899947_08900924
gene name MAF
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 8899530 ~ 8900955 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000028_08899947_08900924.mRNA
CTATAAAACTCAGCAATGCTTTTAAACTCTACTGTAGTGGGTCGAGTTTTAAAACTCTCTCAGCTCGATCTGTGTCAACAGCATTTAGCGCACGTATTTCACGTTACACTTACCCGTTTGACCACGATGATGTCTGCTCTTGAGGAGTCACCAAAGTGTTAAATGTTTGAAATACACGGCCGCCGAAATCCACATGTAAAGAGAAGAGAAAGAGATCCAATGCATTTTTGCAATAGACTTTGCCAAGGAGAGCTCATAATCTGGAGTTAGGAGAGCACTGAAAAGTCCTGTGCAGTATTTGTTTTCCTGCAAAGAGTAAAGCATTTAAACATCATCAAGCTGGCTCACTCTCTTCCGACCCAGCCTGCTTTGACAGCTGCTCTTCACCCGCTCTGGAGGACGGTCAGCAGCAAGAGGATGGCATCAGAGCTGGCACTGAGCAGCTCCGACCTGCCCACCAGTCCCCTGGCCATGGAATATGTTAATGACTTCGATCTGATGAAGTTTGAGGTGAAGAAAGAGCCACTGGAGCCCGATCGCAGCATCAGCCAGTGCAGCCGCCTAATCGCCGGGGGCTCCCTGTCTTCCACCCCGATGAGCACGCCCTGCAGCTCAGTTCCCCCTTCCCCAAGCTTCTCGGCGCCCAGCCCTAGCTCCGGGAGCGAGCAGAAGGCGCACCTGGAGGATTTCTACTGGATGACCGGTTATCAGCAGCAGCTCAACCCCGAGGCGTTGGGCTTCAGTCCCGAGGACGCGGTTGAAGCGCTGATTAACAGCACACATCAGCTCCAGAGCTTCGACGGCTATGCAAGAGGGCAGCAGTTTAGTAGCGCAGCCGGACCGGGAGGCGCCATGGCCGGGGAGGAAATGGGATCCGCAGCTGCGCACAGCCACCTGGACGATCGCTTCTCGGACGAGCAACTCGTTACCATGTCCGTGCGTGAGCTCAACCGGCAGCTGCGCGGCGTCAGCAAAGAGGAGGTGATCCGACTCAAACAGAAGAGGAGAACCCTTAAAAACAGAGGCTATGCCCAGTCGTGTCGCTACAAGAGGGTCCAACAGAGGCACGTACTGGAGGGTGAGAAGACCCAACTCATGCAGCAGGTGGACCACCTCAAACAAGAGATCTCCAGACTGGTGCGTGAAAGAGACGCGTACAAAGAGAAGTACGAGAAGCTGGTGAGCAGCGGCTTCCGAGAAAACTCGTCGAGCAGCGACAACAACCCCTCATCCCCGGAGTTTTTCATGTGAGTCCCCTAAAAAAAAAAAGCCTAAAAAAGAA

Function

symbol description
maf Enables identical protein binding activity and sequence-specific double-stranded DNA binding activity. Predicted to be involved in lens fiber cell differentiation and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within several processes, including regulation of chondrocyte differentiation; regulation of transcription by RNA polymerase II; and sensory organ development. Predicted to be located in cytoplasm. Predicted to be part of chromatin. Predicted to be active in nucleus. Implicated in Ayme-Gripp syndrome; cataract; and cataract 21 multiple types.

NR:

description
Unknown (protein for IMAGE:6997158), partial

GO: NA

KEGG:

id description
K09035 CMAF, MAF; transcription factor Maf

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000028_08899947_08900924.mRNA True 1282 mRNA 0.53 2 8899530 8900955

Neighbor

gene id symbol gene type direction distance location
CI01000028_08771015_08787659 NA coding upstream 111624 8770780 ~ 8787906 (+)
CI01000028_08769236_08770237 NA coding upstream 129293 8769236 ~ 8770237 (+)
CI01000028_08717545_08739805 PPFIBP2A coding upstream 158731 8717545 ~ 8740799 (+)
CI01000028_08595383_08629444 SYT9, SYT9A coding upstream 270002 8595321 ~ 8629528 (+)
CI01000028_08302370_08504940 SPON1, SPON1A coding upstream 394590 8302247 ~ 8504940 (+)
CI01000028_09008686_09011637 NA coding downstream 105445 9006400 ~ 9011804 (+)
CI01000028_09071285_09094934 NA coding downstream 169994 9070949 ~ 9094984 (+)
CI01000028_09237132_09261831 NA coding downstream 335967 9236922 ~ 9261991 (+)
CI01000028_09309487_09309859 NA coding downstream 407857 9308812 ~ 9310221 (+)
CI01000028_09393014_09393339 NA coding downstream 492059 9393014 ~ 9393480 (+)
G150427 NA non-coding upstream 21707 8877596 ~ 8877823 (+)
G150426 NA non-coding upstream 22037 8877209 ~ 8877493 (+)
G150425 NA non-coding upstream 29708 8869285 ~ 8869822 (+)
G150424 NA non-coding upstream 30843 8868352 ~ 8868687 (+)
G150374 NA non-coding upstream 141699 8757548 ~ 8757831 (+)
G150616 NA non-coding downstream 148704 9049659 ~ 9049887 (+)
G150619 NA non-coding downstream 150976 9051931 ~ 9052137 (+)
G150653 NA non-coding downstream 201804 9102759 ~ 9103032 (+)
G150748 NA non-coding downstream 318395 9219350 ~ 9219635 (+)
G150750 NA non-coding downstream 322653 9223608 ~ 9223995 (+)
G150398 NA other upstream 107410 8791735 ~ 8792120 (+)
CI01000028_07470324_07471346 NA other upstream 1428830 7469543 ~ 7471432 (+)
G147693 NA other upstream 3445920 5440454 ~ 5453610 (+)
G147636 NA other upstream 3682919 5216090 ~ 5216611 (+)
CI01000028_09661097_09682326 NA other downstream 772172 9660747 ~ 9684876 (+)

Expression


Co-expression Network