CI01000028_09734656_09750703 (GSE1)


Basic Information

Item Value
gene id CI01000028_09734656_09750703
gene name GSE1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 9732981 ~ 9751123 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000028_09734656_09750703.mRNA
CTATAAAAGAGGACATGTCACAGACTTCTGTTGATTTCACAAGCTAATTATAATGGCTGCAGTGTAACCTGAACCACAGCCCTAAAGAAAATGTTGACATATTGTTTGTTTAATTCATATTTTTATTTATTTATTTATTCATTTTTTACAATTGAGGTTGCCAGGTTTTGTCAAAACTTTTGTCACAATTTTGTCACCAAACTCTGGCTAGTAAACCCACGTTCACACAGAGGTTGTAATGCAGTCAATGACCAGAAGAGGGCGTAGAGTTAACAGTTACTATTTACTCTATATTATTGTTTTGATTTTTTTTTAACCAGTTACAATGACCATAAAAATGGGATTCTCTATTTAAAAGAGATTAATTTAAAAATCACCTGTTGAACACATCAGCATTAAAGGGGTCATGAGCTGCATTTTTTTTTTTTAATTTGATAATTTTCAGTCAGGTCCACTTATAATGTTACCAAGATTTTTACACCAAAAACCATCCTAATTTAGAAGTAATAAGCTATTATCTATCCTGTTTTTGACCCTCTCTTTCAAACACTCCATTTTGATGGGCATGATGCATTCGAGGCTTGGAAGTAAACGCCCACTGCTATGATTGGGTAATAGTTTTGCAAACTAAAATCATTTTCAGTGTCCCTGCGATTATGCTTGTGGAATAGTTTTGCAAACTTCCGATGTTGAAAAATATCCAGTTACATAGTTGAAACATTTATGCATAGTACATATGCTTTATAAGTCATGGTTGTGGCAAATAAAGTTTACTTTGGAGTTAAGATATGGAATTATGAATGAATGTGCCATTGTTTGTCACACTGTCAATTTTATATTCATAGTTCATCCTTTTTGATAAAGTGGAAAACGTATAGATTGTCATTTGCAGTGTCGTGTTTTAAATAAAATGAAAAGTGTTGTAATGTCTTACTGATGACAAAACAGAAGATGTCCGTCACTGAAGCTTTTATTCAGGATTATAGGATTATAGCGAGTGCCTTAGATCACAACAAAAACAGCGTTCTCTACATGCTTTCTTCTGTATCCGATAATCCAACACATTAACCCCATAAATGCCAAAGCAAAGAAAAGAACAGCAAATCAAATGTCAAATATTACCCCAAATACATTGTTTTATGGTATATTACTGTTTCAATAGAAAACGGTATTTTCCTGTGTAAATTTGTTTTTACAGTTATTTTTTAGAATCTGATGACTGTCAACATTGGTCTGAGTCTGTCAGTGCAGTGTGAATTGGCCTTTATCTGTCCTTAATATTTTTATTATGTAAAAACTGGTTAATAATAATAAAAAAAAATGCAATAAGGCATTTAAGGTCATGCAATATATATATATATATATATATATATATATATAATGCCTAACAGCATCCTTTAATCGTGACTATACTACTAAAAATATAGCACAACCTCTCATAGTTTATTTCTTAAATGAACACCCTGCAGATTCCCAACATAGCAGAAAGATCACATGGAAGATGTTCACAGCATTCGACAGCCCCAAAGATCTCTATCTGTTTGATTTATATTTGTGTTAAATGAGAGGCGCAGAAATGTCCTCCAGACTCTGTTAATGGTGCTTTATGGATTTCAATAACCTCTGTACGCTGCAGTTAAATGTCATTAGCCATGGAACGCATAAAGAAAAAGCGATGTGGGTAATGGCGAGGTCTTTGCCTTCTCCAGCAGCCTGTTCTTTGCTCAATAAATGGATCAGGGCCGAGCCAGGTCCTCGTGGACTCAGCCGGGACAGGTTAAGTTCAGAGGCTGCTTCTACCCAAGAGAAGGGGGGTCCCACTGTCCCAGCCCACCTAATTGGAAACCCTTATGCATTTGGCTTGACGCCTGCATCTGTGATGCAGGACTCGCGCTTTCAGCCCCTTAACCTGCCCCGTCAGATGCCCCATGCTGTGCCCCCGACCAGTGTTCCAGAGGAATATCTGAGAGGGTTTCGTCCTTACACCACAGCTGAGGAGCTACGCATGCCCTCGTTACCACTGGGGCTTGATCCTGCCACTGCTGCAGCTGCTGCTGCCTACTACCATCCTGGATATCTGCCCCATCCTTCCTTCTCACACTACAGCGCTGAGGTCGCCGTTCTATCCACTGCCTACAGGGGGAGCTCTACCTCCTCTACACCCATCTGCAGTACACATGCACCTACCTGGGATAAAACCAAAGAGCCCATTCTTACAACCCCTAAACCCATCCAGCCTGGACTCCACCACTCTCTAAACTCCACCCACCACCCTGTGCCCAGCCTCGTCTCTGCCCATGGCATGTATCTGGGCCCTGGGGGGGCGGGACCTGCCGGTCTGACAGCAGCGACCATGCTGCAGCGCACTAATGAGGAAGAGCGCTGGTTGGCCCGGCAACGGAAACTACGACAAGAGAAAGAGGACAGGCAGTACCAGGTGTCAGAATTCCGTCAACAGGTCCTAGAGCAGCACCTGGACCTGGGCAGACAGGGGGAAATCGCAGATCTGCATATAGAGGGACACAGACCTGTACCAAACCATCATGAGCCCAACAGCAGAGATCGTGACCGAGACAGAGATGCCCATCCTCTCCTGGGAGCTCCGCCCCCTCTTATCTCCCCAAAACACCAGCACAAAGATCAGGCCCCCCCACCTCCAACCACGCTCTGGAACCCTGCATCACTCATCGAGACCTCCTCTGACTCTCGACGCACCTTGCACGACCCCCCGAGTCTGGGTCACTACGATATCAGTCGGCTTCCCCTACCCCCCTCCAAACATGAACGGCATTACAACTCTGAAAAGCTGGAAGAGGGATCTCGGAAAAGGGACAGTCTGGATAAATATCCCCCCATCCGGCCCACTGGGTTCTCTGAGCCGAACACTTTCTTAGCAGAGCTGGAAAAATCTACCCAGAGCTTCCTGAATCAGCAGAGGGCACCGCTAAGTCTTTCAGGGCCGTACGGAGAGCTAAGCACAGGCCTGAAGTCCAGCGGGTCTTTTAAGAGCCTCCAGGGGCATTCACGCCTCGCACCGGATGCCATGTTAGTGTATGATGAGTTCCTGCAGCAGCACAGACGAGCTGTCAGCAAACTAGACCTGGAGGAGAGAAGACGCAGAGAAGCCAGAGAGAAAGGTTACTACTACGAGCTGGACGACTCTTATGACGAGAGTGATGAGGAAGAGGTGCGAGCTCATCTTAGGAGGGTCGCTGAACAGCCGCCACTCAAATTAGACGATTCCACCGAGAAGGTGGAGTTTCTGCAAATGTTTGACCTGACCACTCTGGCCCGTCGGGAGGAGATGATGGAAGTAAAGAGGAGGAAGAGGAGGCGCATGCTGAGAGAGAGGAGTCCCTCCCCACCAGCTGTTCAGAGCAAGCGGCCAACTTCTGCCCCCCTGATAACCCGCTTTACCCCAGAGGACATGAACAACAGCCCTGAGCTGGAGGACAAGAAACGCTTCCTCACCATCTTCAGCCTCAACCACGTCACACAGCAGCAGAGAAGAGATAATGAGAGAGTTGAGGAATTGTTGCAGGCCATAAAACAGAAGAGTGTGACTCTAGACAGCATCAGACACAATCCTCACCCACTGTGCAGGAGCCCTGCAGCCCCATACTTGGACCCATCATCTCAGTCTCCAGTCCAATCCGAAGAGCTGCTGAATGGACGGCCCCCCAGTCCTTCCCCATCTGTGTCCGTGCCCCAGCCCCCAGCGGACCCCCTGTCCATCTCGGATCAGCACCGATCCCTCTCTGATCCCTTGAGACCGAAAGACTCTTCCTTCCCTGCTGCATTACCTGACAAAGGTCAAGCCAATGACAGCATCCCTGGCAAGAGCTCTAGTCTGCTGAACAGTGTTCGACAGCCCCCATTCACTAAAGAGAGTTCTGTTAGTGTCAATGGAAAGACCAAACCCTGGGAGAGCTTTATTGCAGAGGAGTTTGCCCAGCAGTTCCATGAATCAGTACTGCAGTCCACCCAAAAAGCCCTTCAGAAGAGTAAAGGTGGTACCTTGGTCATGTCAGAACAGAACCATGCAGTGGATTCATCCGTGCATTATAACATTCCTGAGCTCCAGAGCACACCAGGCCGGTCCAAGCCCTACCCACACCCTCCCTCATCTCAGCCCAATGGACAGCACTGCCCCTCACAGCCCTCCCACCAGGAGATCTCTGCCGAGGAGTCTGAGGAAGAGGATGAGGAAGATGACACTGAGGAGGATGAGCCCTCCACGTCCAGGTGGCAGGGTATTGAAGCCATCTATGAAGCTTATCAAGAGTACACAGAAGAGCAAAGCATTGAGCGACAGGTTCTCCACAGTCAGTGCAGACGGCTGGAGGTGCATCACTATAATCTCAGTGTAACTGCTGAACAGCTCTCACACTCAATGGGGGAGCTAATGGCTCAGAAGCAGAAGCTGGCGGCCGAGAGGGAGAACCTACAGGCAGAGCTGGAGCACTTTAAGAAGTGCCTGACGCTGCCTCAAAGCCCCTGGTCTAGGGTTCACTTCAAGGGCTATCCACCCAGGTGACATCCTTCGGCACCACCAACCACCCACTTAGACCACCCCCCACATCCCTCCCAATCCCCCAAACCCAGACTCATGCTCCGTCCATTCGGAGAGCCTAAAGAGAGATAGTGAGGAACAGAAGATCTGGCCCACAAATTTGCCATCCACTGACCTCCCCTCCGACATCATCCTGTGAGCGAAATCACACATGAATAGACATCAAAGCCTCCGAATGCATCTAATTCACAGAGAATGCCATACCACTCATTGAGAAAGAAGAACGCAGTTGAAACACAGCTCCGCCCACCTGCCATCTCTTTCCCATGGAGGTCATGCCTAGAAATGCACTTAAAGACAAAAAACCCGAGAAACTATCTGGAGGTACTGTTATGACAGATGACTCTTTTAAATCTAGGGAAGGAAACAAAAAACATCAGATAA

Function

symbol description
gse1 Orthologous to human GSE1 (Gse1 coiled-coil protein).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000028_09734656_09750703.mRNA True 4957 mRNA 0.47 13 9732981 9751123

Neighbor

gene id symbol gene type direction distance location
CI01000028_09715717_09725995 NA coding upstream 6963 9715717 ~ 9726018 (+)
CI01000028_09661097_09682326 NA coding upstream 49499 9660747 ~ 9684876 (+)
CI01000028_09517515_09519873 GSE1 coding upstream 212930 9517515 ~ 9520051 (+)
CI01000028_09455235_09456745 NA coding upstream 276203 9455235 ~ 9456778 (+)
CI01000028_09438121_09447264 ATMIN coding upstream 285512 9437945 ~ 9447469 (+)
CI01000028_09798069_09800552 COX4I1 coding downstream 46946 9798069 ~ 9800598 (+)
G151029 NA non-coding upstream 219036 9513717 ~ 9513945 (+)
G151010 NA non-coding upstream 321172 9411437 ~ 9411809 (+)
G151009 NA non-coding upstream 322065 9410698 ~ 9410916 (+)
G151008 NA non-coding upstream 322886 9409354 ~ 9410095 (+)
G150991 NA non-coding upstream 360407 9372193 ~ 9372574 (+)
G151050 NA non-coding downstream 41841 9792964 ~ 9793174 (+)
G151060 NA non-coding downstream 49811 9800934 ~ 9802018 (+)
G151063 NA non-coding downstream 56073 9807196 ~ 9807690 (+)
G150398 NA other upstream 940861 8791735 ~ 8792120 (+)
CI01000028_08302370_08504940 SPON1, SPON1A other upstream 1300429 8302247 ~ 8504940 (+)
CI01000028_07470324_07471346 NA other upstream 2262281 7469543 ~ 7471432 (+)
G147693 NA other upstream 4279371 5440454 ~ 5453610 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_012855 gse1 coding NC_007129.7 CM002902.2 30157034 ~ 30480827 (+)