G147343


Basic Information

Item Value
gene id G147343
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 4364212 ~ 4364594 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU167361
CAAGCCCAACCCCTGAAAAACAACCCCACACCATAATCCTCCCTCCACCAAACTTTACACTTGGCACAATGCAGTCAGGCAAGTACCGTTCTCCTGGCAACCGCCAAACCCAGACTCGTCCATCGGATTGCCAGACAGAGAAGCGTGATTTGTCACTCCAGAGAACACGTCTCCACTGCTCTAGAGTCCAGTGATGGCGTGCTTTACACCACTGCATCCGACGCTTTGCATTGCACTTGGTGATGTAAGGCTTGGATGCAGCTGCTCGGCCATGGAAACCCATTCCATGAAGCTTTCTATGCACTGTTCTTGAGCTAATCTGAAGGCCACATGAAGTTTGGAGGTCTGTAGCTATTGACTCTGCAGAAACTTGGCAACTTCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU167361 True 383 lncRNA 0.51 1 4364212 4364594

Neighbor

gene id symbol gene type direction distance location
CI01000028_04240962_04247433 NA coding upstream 115790 4240122 ~ 4248422 (+)
CI01000028_04224432_04233899 NA coding upstream 130000 4224226 ~ 4234212 (+)
CI01000028_04216684_04219734 NA coding upstream 144435 4215386 ~ 4219777 (+)
CI01000028_04145294_04156879 NA coding upstream 205559 4144943 ~ 4158653 (+)
CI01000028_03946366_03958585 NA coding upstream 404389 3944521 ~ 3959823 (+)
CI01000028_04441930_04444388 TTC36 coding downstream 77272 4441866 ~ 4444480 (+)
CI01000028_04729544_04888382 CNTN5 coding downstream 364950 4729544 ~ 4888382 (+)
CI01000028_05039088_05063207 NA coding downstream 674494 5039088 ~ 5063207 (+)
CI01000028_05114584_05116494 RNF7, RBX2 coding downstream 748924 5113518 ~ 5117062 (+)
CI01000028_05120588_05127452 GRK7B coding downstream 755589 5120183 ~ 5129029 (+)
G147327 NA non-coding upstream 46935 4316775 ~ 4317277 (+)
G146931 NA non-coding upstream 93472 4270476 ~ 4270740 (+)
G146927 NA non-coding upstream 106560 4257180 ~ 4257652 (+)
G147350 NA non-coding downstream 26994 4391588 ~ 4391916 (+)
G147356 NA non-coding downstream 40777 4405371 ~ 4405695 (+)
G147359 NA non-coding downstream 47554 4412148 ~ 4412350 (+)
G147363 NA non-coding downstream 73460 4438054 ~ 4438299 (+)
G147364 NA non-coding downstream 74168 4438762 ~ 4438984 (+)
G145843 NA other upstream 1339992 3023146 ~ 3024220 (+)
CI01000028_00525538_00533862 NA other upstream 3842281 524647 ~ 535245 (+)
G147462 NA other downstream 594109 4958703 ~ 4989838 (+)
G147636 NA other downstream 851496 5216090 ~ 5216611 (+)
G147693 NA other downstream 1075860 5440454 ~ 5453610 (+)
CI01000028_07470324_07471346 NA other downstream 3105298 7469543 ~ 7471432 (+)
CI01000028_08302370_08504940 SPON1, SPON1A other downstream 3937653 8302247 ~ 8504940 (+)

Expression


Co-expression Network