G150815


Basic Information

Item Value
gene id G150815
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 9313204 ~ 9313485 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU171267
GATTCATACCACTGCTAGCTAAAAGGAAGAACTTTGTCAACGTTAGGCTGTTTGTAAAAGACCAATTGGTTTGGAGAGGGCACAGCTTGAGCCCCTTGAAGATAACACCAGAAGTTGTTTGATCCCTGAAACATAGATACAAAACAGACCTTCTTCTTCTGAGTGACCTCTGAGTGACACAGAGTTGAAATCCACAGGAAAACCCACAGACACTGGGTCTCATTTACTAATAATTGCATGGATTATTTCGTATTTGTACGCACAGGAGAACTTCTCATGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU171267 True 282 lncRNA 0.41 1 9313204 9313485

Neighbor

gene id symbol gene type direction distance location
CI01000028_09309487_09309859 NA coding upstream 2983 9308812 ~ 9310221 (+)
CI01000028_09237132_09261831 NA coding upstream 51213 9236922 ~ 9261991 (+)
CI01000028_09071285_09094934 NA coding upstream 218220 9070949 ~ 9094984 (+)
CI01000028_09008686_09011637 NA coding upstream 301400 9006400 ~ 9011804 (+)
CI01000028_08899947_08900924 MAF coding upstream 412249 8899530 ~ 8900955 (+)
CI01000028_09393014_09393339 NA coding downstream 79529 9393014 ~ 9393480 (+)
CI01000028_09420414_09428472 CENPN coding downstream 105951 9419436 ~ 9428829 (+)
CI01000028_09438121_09447264 ATMIN coding downstream 124460 9437945 ~ 9447469 (+)
CI01000028_09455235_09456745 NA coding downstream 141750 9455235 ~ 9456778 (+)
CI01000028_09517515_09519873 GSE1 coding downstream 204030 9517515 ~ 9520051 (+)
G150809 NA non-coding upstream 9770 9303118 ~ 9303434 (+)
G150808 NA non-coding upstream 12964 9299993 ~ 9300240 (+)
G150799 NA non-coding upstream 22607 9289361 ~ 9290597 (+)
G150762 NA non-coding upstream 76888 9236104 ~ 9236316 (+)
G150759 NA non-coding upstream 81077 9231822 ~ 9232127 (+)
G150817 NA non-coding downstream 1215 9314700 ~ 9314972 (+)
G150821 NA non-coding downstream 4912 9318397 ~ 9325837 (+)
G150957 NA non-coding downstream 28427 9341912 ~ 9342176 (+)
G150962 NA non-coding downstream 37606 9351091 ~ 9351365 (+)
G150963 NA non-coding downstream 39643 9353128 ~ 9353379 (+)
G150398 NA other upstream 521084 8791735 ~ 8792120 (+)
CI01000028_08302370_08504940 SPON1, SPON1A other upstream 880652 8302247 ~ 8504940 (+)
CI01000028_07470324_07471346 NA other upstream 1842504 7469543 ~ 7471432 (+)
G147693 NA other upstream 3859594 5440454 ~ 5453610 (+)
G147636 NA other upstream 4096593 5216090 ~ 5216611 (+)
CI01000028_09661097_09682326 NA other downstream 359642 9660747 ~ 9684876 (+)

Expression


Co-expression Network