CI01000029_06431763_06439215



Basic Information


Item Value
gene id CI01000029_06431763_06439215
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 6431720 ~ 6439215 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000029_06431763_06439215.mRNA
TGAGAAAGCCAATTTAGCCGTGACCCTGAGCACCGCTAAGAGTGAAGTGCTCGCCCATGCATCTTTCTCAGATCACCCCACTGAAGAGCTAGTGGATCAGGCATGCTGGGAGAATTTACTTCAGAGTCACGTAAATGGCGAGAAATTCACTCCCATGAACACTCTTTTCCTGCGTCTATTTGTGGCTCAGCCCGGCTTCTCCATAGGGGGCGCTAAAGAGATAGTGAGAACAGTTTTCAATGCCGTTGTGGAGCTGGAACACATCTGCCTTCTGACTCCCTACAGAGGCTCACTTGAGGCAGGACTGGAGAAGATCTTTGAACCACTGACGCCTGTTGTGGAGGAAGTTCAGTATTCGGCCTACGTTTGTCATCGACACAATCACTGCTCTCGATTTCACATCCGCAAAGCCAGGTTTACAAACACCTCTCACTCTCTCATGGACTGTTTATATCAATATTCAGTTTATACAGGACATCTGCAGCACAGCGATGAATTAAAATCTCGATGCAATAACTTCAAATTCCCCAGAGTAGAGGATCACGATGACATCATGCACATATTTGCAGAGCAGATCACGCCACTGGTGGAGTCCCACGGGCCGTACTTCCTGTCTGAGCTTATCGAGGTTCAAGACGAGGAGAACCATGCAGCCATCTGTGAATGCTTTGATCTTGGAGCATTTGAAGGACTGAGAAAGACAAATTCAGCACATCAAGAGGAACCACCAGAGGAACCACAACTGCTGGAGGAGGAAAACCATGTCACTGATGCCCAGGAGTCTTCTGAAACCAAAGAACCTGTGGAACCAGAGTATGTTGAGTCAAGCATCAAAGACACAGTGGACTCCAGTGAGGACTCTGAACCAGACAGACCTCCTAATGCATTCTGCATCCAGCTCTTCACCATGGAAAAGAAGTTTGAAATGAGATCAGCAGATTTCTTGCCGTACCTGTTTAAACTGTTTCCGGATCGGGACTTCTGTGTGATCTCAGTGCCTAAACTGACTCCAGATTTCCCGCTGCTGCAGTCCTTCATCAGAGTCGCCCCTCGTGACACCAGCATCTTCCCGCAGGAACTCTACCTGTGTCACCGGTGGGGTCTGCTCAGGACATTGGAGGTGCGTGTGGCAGTGTCATCAGATATCCCAGCAATCCAGAGTTTGACTGAGAGTCTCAGCCAGCGGGAGTCCATCAGTGAAGATCTGGATCTGTTCCTGCAGGCCCGAAAAGACCCGGATGGAACTGCTCTTCAGGCATTTGTGGCGCAGGTCGAGGGGCGAGTTATTGGTTTGATAATCATCAGAGATGAAGAGGACATTGAGTTCATCCGAGCTAACTTTGACGTCGAGAGGTTCATGTACTTCAGCCACCACCAGCGAGAGGAGCACGGTCGACTGTGTCACTTTCTCCTCAACCCTGTTTTCCAGCATCACGCCAAATATATCTTCAAAGAGGTGCTGCGCTTGGCGCACAAGTCCTGCCTTTACTACCTTCTCCATCCACCCCATTATAGCCATAAGAATGTCAGTTGTCACTCTCTGACAACAGTACTGAATTTCATGGTGCCGGTGAGCCCGAGACGACAGATAATCTACCCGCTGGAAGAGCTGGGTATCAACGCACCATCCCAGCAGATCACCCAACAACAGGTCAGACCGAAACCAGCTTCCTGAAATATGAACATAATTGTGCATTTAAAGCAATTTGACAATTAAA

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000029_06431763_06439215.mRNA True 1718 mRNA 0.49 13 6431720 6439215

Neighbor


gene id symbol gene type direction distance location
CI01000029_06410464_06420256 CFAP61 coding downstream 11464 6410022 ~ 6420256 (-)
CI01000029_06406402_06408397 INSM1A coding downstream 23323 6406069 ~ 6408397 (-)
CI01000029_06320111_06340400 XRN2 coding downstream 91320 6320105 ~ 6340400 (-)
CI01000029_06283570_06287370 PAX1B coding downstream 143453 6283379 ~ 6288267 (-)
CI01000029_06238355_06240993 NA coding downstream 190727 6238184 ~ 6240993 (-)
CI01000029_06449255_06451786 NAA20.S, NAA20, RIN2 coding upstream 9897 6449112 ~ 6451786 (-)
CI01000029_06486658_06492567 NA coding upstream 47255 6486470 ~ 6492567 (-)
CI01000029_06606850_06665941 NA coding upstream 167635 6606850 ~ 6666150 (-)
CI01000029_06666877_06679215 NA coding upstream 227615 6666830 ~ 6679215 (-)
CI01000029_06689615_06698873 NA coding upstream 250322 6689537 ~ 6698873 (-)
G156285 NA non-coding downstream 46711 6384761 ~ 6385009 (-)
G156266 NA non-coding downstream 161600 6269919 ~ 6270120 (-)
G156249 NA non-coding downstream 354088 6076162 ~ 6077632 (-)
G156222 NA non-coding downstream 461505 5969997 ~ 5970215 (-)
G156219 NA non-coding downstream 474524 5956866 ~ 5957196 (-)
G156345 NA non-coding upstream 99308 6538523 ~ 6539321 (-)
G156357 NA non-coding upstream 136512 6575727 ~ 6575986 (-)
G156358 NA non-coding upstream 138686 6577901 ~ 6578184 (-)
G156359 NA non-coding upstream 139046 6578261 ~ 6578493 (-)
G156362 NA non-coding upstream 157274 6596489 ~ 6596700 (-)
G154415 NA other downstream 1444295 4986108 ~ 4990990 (-)
CI01000029_04460778_04463540 FKBP1B other downstream 1954508 4460159 ~ 4463540 (-)
CI01000029_03698769_03707177 NA other downstream 2724468 3698572 ~ 3707883 (-)
G153891 NA other downstream 3145166 3248777 ~ 3286554 (-)
CI01000029_02589994_02592379 NA other downstream 3838918 2587549 ~ 2592379 (-)
G156542 NA other upstream 731152 7170367 ~ 7170951 (-)
G156495 NA other upstream 927112 7365007 ~ 7371921 (-)

Expression



Co-expression Network