CI01000029_02589994_02592379


Basic Information

Item Value
gene id CI01000029_02589994_02592379
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 2587549 ~ 2592379 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_02589994_02592379.mRNA
GTCGTTTGATATCTACTAATTTTGTGTACGTGTCTAAGCAGTCACAGAAGGGTCCAACTATGAAGGACGTAGCTTGTCAAACAGACTCACGGAATCTTACATCACAGGGCACACAGCTGGCTTTTAGAACCTTGGGACCTAAATTCAGAAGCAAAGGCCACTCTGCAAAGTATGGTACCTATACCTTAATGGACCTTGAGAGCAACATCATATTGGACATACAGCTAGTGCAGAGCAATGAGGTAGCAGGAAGTTACCATATGGAAAAGGAGGGACTAAAAAGAAGTCTTGGACATCTGGAGGCACATGGTGTAAAGCTTGAATGCATTGTTACAGATCGCCATCCACAGATCCAAAAAATTTTGAGGGAACTAAACATACCACAGTTCTACGACATCTGGCATCTGGAGAAAGGCTTGTCTAAGAAGTTGGAAAAAATCAGCAAAGATAAGGACTGTGAAGTAGTGAAAAAGTGGCAGCAGAGCATAAAAAATCATGTCTACTGGACTGCAGCTACTTCAAAAACACCTGTGGAGCGAGTAGCAAAATGGAAGTCCATGGTAAACCATATTCAAGACATTCATGTACATGACAACCCATCATACCCCCAGTGCAACCATGAAATCCGTGAATCGACTGATCGCAGCAAATGGTTCCAACCAGGAACCAAAGCACTGTATACTGTTGAAAAGATTCTTACAAACAAGAGAATGATGAAAGATATCAAGAAACTCAGCCCTCACTTTCAAACTTCATCTTTGGAATCTTTTCACAGTGTCATTTTACGCTTTGCACCAAAAAACGTGGTTTATCCTTACCTCGGAATGTTGTGCAGACTTTATTTGGCAGGTATGCATTTCAACGAGAACTCCAATCGTCCTCAGGCTAAAACATCGACTGGAAAGCCAATGTATAGGCTTTTGTTTCCCAAAGCCAAAAAAGGAATATATTCCATGAGGCCATTAAAGTCACAGGCAACATATTGCTATGTCATCAATCTGATGGCATTTCTTTTTGAGAAGGTAATCCCAGACCCTCTTCCCTACATGGAGGAGATCCACAAAATCAAGGTCCCTGAAACACTGTCCGCCCAGTATGACAGACCCTCCATGGAAGAAGCCATCGCAAGGCATGTATCACTGTTCAGTCAAGGGGAGGTCTAAATCCTACGCAGCTGCCTCCAGCGTCAGGAAATTCTTGGCATATGCGCAGGACAACACAAGACGGGATAACAACCCTGATCTTCCGGCCCAGATAGCCCCAGCACCAGCTCACAAAGCTCCTGTATGCTAAGTGCCTGTAACACCTAATGTGAAAGACATTGATAAAGTCAGACAAATTGCTTTATCTGCTATTATTGTCAATTGAGGACAAATGTTGTAATTATATATATATATATATATATATATATATTTCATTGATTTGTAATAAAAAAAAAAAAACATTAAAAAAACATTTCACCTGTTCTTGTGTTAAAATAGTGTTTTCATTGAAACATAATATTGTATGAAATTTACTTAAATTCAATTCTAATGCAATGACTGCTTTACAAAATAGTTATATTAGAAACTGAATTATATAGACTTTAGTTACGTTACATAAATCATACTGTTCTATTTCTCTGAGTCTCAAAGGGCCATGATCCGCTCTGTAAACATTAAGTGCGTTCTGCAGAGAATACACATTAAGGCACACTGGTTCAAAGCCTGGGTGATGTGTCATGCATGTAAGTGTGTCTTGTACCTGGTTAATCCTTCTAACAATCTACAAAACAAGAACACTGTAATTCTCTCTATATATTTAACATTCACATTAATATAAGTAGACAAAAACATGTGCCTTGTACTTACCTGAGGAATCTCCATGCAGCATATATTTTCTCGTTCAGTTGGCATAACAGCACAGTTTGCAGTTACACCTACAATAACGTAAACGTTTTACACTTCACTGACCATGTTGAATGAAAAATTAAGGTACAACATTTGACAAACTGGTTCATTCATTCATAATTCATTAACATGAAACAGTAATTTAACCTTTATTTCTTATATATCTGTGTTAAGTACAAGTACATAGACCTGACTTGTCACAACCAAAACGTATAAGGCATATGTAGTACGCATAATTGTTTCACATTATTGATAAATATTTGAATTTTGACTAAAAACTTTGTCTAACGTCTTTGGTTACACTATAATATAAAATTATACAAACCTCAAAGACACATTAGAAGTAAACAATTAACGATAACTTACCACGTTGTCACAGTCATTTCAAAAATTCTTTTGACATTTTTGTCATAAAATTCAAATATTAAATACATTTTTAACGCTCCTGATTGTGGCGTGACAGATTTTTGTAGCCACCTCAGTTCCAGCGAAGCGGCGACACAGAGCGCACTTAAACTGATCTTTTTATTATTATTATTTACTACTAGCTATTGCGCGAAATAAACATGAATGAACATCAGAAGGTATGTTTAAAGATACTGAACAACTTACTGAAATGTCTCATCTCATTTAATCGTAGTGGAAAGACCTCTTGTAAACAGTGTCACGTAACGCTAAATTAACGTTACCTCAGGAAAGACATTCATAGCTCGCTACTTAGCAATTTTCAAACTCCACTCAGGACATAATCTGGGTTTTAAACCTTTAATAAGATGAAATTGGGTGATTACAATGCATCTCAAAAGGCAAAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_02589994_02592379.mRNA False 2707 mRNA 0.37 7 2588450 2592379

Neighbor

gene id symbol gene type direction distance location
CI01000029_02539755_02540836 FABP7B, FABP7 coding downstream 47045 2539729 ~ 2542444 (-)
CI01000029_02532272_02537205 SMPDL3A coding downstream 51245 2532200 ~ 2537205 (-)
CI01000029_02502175_02516608 CLVS2 coding downstream 71070 2502156 ~ 2517380 (-)
CI01000029_02359382_02359992 NA coding downstream 228458 2359013 ~ 2359992 (-)
CI01000029_02254888_02257580 NA coding downstream 330870 2254877 ~ 2257580 (-)
CI01000029_02593889_02603627 HSF2 coding upstream 1012 2593391 ~ 2603627 (-)
CI01000029_02738375_02739517 GJA1, CX43 coding upstream 145675 2738054 ~ 2740239 (-)
CI01000029_02742245_02743081 CX32.2 coding upstream 149574 2741953 ~ 2744224 (-)
CI01000029_02753815_02761288 CX28.9 coding upstream 161369 2753748 ~ 2761527 (-)
CI01000029_02762066_02762926 CX32.3 coding upstream 169228 2761607 ~ 2763768 (-)
G153124 NA non-coding downstream 97104 2490240 ~ 2491346 (-)
G153166 NA non-coding downstream 136984 2450954 ~ 2451466 (-)
G153165 NA non-coding downstream 139583 2448537 ~ 2448867 (-)
G153164 NA non-coding downstream 140608 2447615 ~ 2447842 (-)
G153175 NA non-coding upstream 15892 2608271 ~ 2608590 (-)
G153176 NA non-coding upstream 19578 2611957 ~ 2612187 (-)
G153178 NA non-coding upstream 24374 2616753 ~ 2616955 (-)
G153179 NA non-coding upstream 25435 2617814 ~ 2618042 (-)
G153180 NA non-coding upstream 25738 2618117 ~ 2618321 (-)
CI01000029_01293143_01293964 BATF3 other downstream 1294327 1292249 ~ 1294123 (-)
G153891 NA other upstream 656398 3248777 ~ 3286554 (-)
CI01000029_03698769_03707177 NA other upstream 1113844 3698572 ~ 3707883 (-)
CI01000029_04460778_04463540 FKBP1B other upstream 1867964 4460159 ~ 4463540 (-)
G154415 NA other upstream 2393729 4986108 ~ 4990990 (-)
G156542 NA other upstream 4577988 7170367 ~ 7170951 (-)
CI01000029_02589994_02592379 NA other upstream 3649 2587549 ~ 2592379 (-)

Expression


Co-expression Network