Gene
RNA
| Item | Value |
|---|---|
| gene id | G153179 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000029 |
| NCBI id | null |
| chromosome length | 9486966 |
| location | 2617814 ~ 2618042 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU173964 | True | 229 | lncRNA | 0.39 | 1 | 2617814 | 2618042 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000029_02593889_02603627 | HSF2 | coding | downstream | 14187 | 2593391 ~ 2603627 (-) |
| CI01000029_02589994_02592379 | NA | coding | downstream | 25435 | 2587549 ~ 2592379 (-) |
| CI01000029_02539755_02540836 | FABP7B, FABP7 | coding | downstream | 76409 | 2539729 ~ 2542444 (-) |
| CI01000029_02532272_02537205 | SMPDL3A | coding | downstream | 80609 | 2532200 ~ 2537205 (-) |
| CI01000029_02502175_02516608 | CLVS2 | coding | downstream | 100434 | 2502156 ~ 2517380 (-) |
| CI01000029_02738375_02739517 | GJA1, CX43 | coding | upstream | 120012 | 2738054 ~ 2740239 (-) |
| CI01000029_02742245_02743081 | CX32.2 | coding | upstream | 123911 | 2741953 ~ 2744224 (-) |
| CI01000029_02753815_02761288 | CX28.9 | coding | upstream | 135706 | 2753748 ~ 2761527 (-) |
| CI01000029_02762066_02762926 | CX32.3 | coding | upstream | 143565 | 2761607 ~ 2763768 (-) |
| CI01000029_02764957_02770946 | HSDL1 | coding | upstream | 146915 | 2764957 ~ 2771393 (-) |
| G153178 | NA | non-coding | downstream | 859 | 2616753 ~ 2616955 (-) |
| G153176 | NA | non-coding | downstream | 5627 | 2611957 ~ 2612187 (-) |
| G153175 | NA | non-coding | downstream | 9224 | 2608271 ~ 2608590 (-) |
| G153180 | NA | non-coding | upstream | 75 | 2618117 ~ 2618321 (-) |
| G153181 | NA | non-coding | upstream | 673 | 2618715 ~ 2618950 (-) |
| G153183 | NA | non-coding | upstream | 2828 | 2620870 ~ 2621369 (-) |
| G153192 | NA | non-coding | upstream | 19240 | 2637282 ~ 2637646 (-) |
| G153195 | NA | non-coding | upstream | 22861 | 2640903 ~ 2641109 (-) |
| CI01000029_01293143_01293964 | BATF3 | other | downstream | 1323691 | 1292249 ~ 1294123 (-) |
| G153891 | NA | other | upstream | 630735 | 3248777 ~ 3286554 (-) |
| CI01000029_03698769_03707177 | NA | other | upstream | 1088181 | 3698572 ~ 3707883 (-) |
| CI01000029_04460778_04463540 | FKBP1B | other | upstream | 1842301 | 4460159 ~ 4463540 (-) |
| G154415 | NA | other | upstream | 2368066 | 4986108 ~ 4990990 (-) |
| G156542 | NA | other | upstream | 4552325 | 7170367 ~ 7170951 (-) |
