CI01000029_06666877_06679215


Basic Information

Item Value
gene id CI01000029_06666877_06679215
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 6666830 ~ 6679215 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_06666877_06679215.mRNA
ATGACGGTCAGGCGTTTGGCAGCGGCCGCTCTCTTAACACTCGCAGTACTGACATCAGTGAGAGCTCAAGTAATGCCTCCATCAGACTTGAAGTTTAAGATTTTAAATGAAAACACAGTGCAAATGATATGGAAGCAACCGCTGTCAAGGATTGAGGGCTTCAGAGTACAAGTGACATCGGGTGCAGAAGAGCCTGTTAAGGAATTCTCACTTCCTCCATCCTCAACCAAAACCTCCATCAGAGATTTGACCCCCGATGTGGATTATGTTGTTACGATAACTTCATATTCTGGATCTGAGGAGAGTATACCAATCTCTGGACAGATTACAATCCAATCAAGTGGTTTTGAAGTAGGTACCAGGAAGCCCCAGGTCTCAGATGCAGTCAAATGCTCAGTAAGTGCCATTGCTGATCTTGTCTTCCTGGTGGACGGTTCTTGGAGTGTCGGGCGGGAAAATTTTAAATTCATCCGCAGCTTCATAGCAGCCATGGCAGGCGCGTTTGACCTTGGAGAGGACAAGACTAGAGTGGGCGTGGTTCAGTACAGCACAGACACCAGAACTGAGTTTAACCTTAACCAGTACTTCAAACGGGCCGAGCTGCTCAGAGCCATTAACAATCTGCCATACAAGGGCGGGAACACCATGACAGGCGAAGCCCTGGACTACCTGCTGAAAAACATGTTCACAGAGACCGCCGGTGCTCGTAAGGGATTCCCCAGAGTAGCCGTAGTTATCACGGATGGGAAATCTCAGGACCCTGTTGAAGGTTACGCCAAGAGGTTGAAGAATGCTGGAGTTGAAATCTTCACTTTGGGGATCAAAGAAGCAGATGAGGAAGAGTTGAAACAAATGTCTTCAACGCCCTACAGAACACACGTGTACACGGTGCCAAACTTCGACATGATCAAAGCTGTGGAGAAATCACTCATCACGCAGGTGTGCAACAGTGTGGATGACCAGCTCAGCTCGCTGGCTAGCGGCGAGGAAGTCGTTGAACCAGCGTCAAACTTGCAAGTCACAGAGGTTGCATCCAAGTCAATGCGGGTGACGTGGGATGCATCTATAGGGGAAGTGACTGGATACAAGGTGCAGATGGTTCCCATGTTGGCTGGCAGCAAACGTCAGGAGCTGTACGTTGGGCCGACTCAGACCTCTGTGAATGTGAGAGACTTGTCCCCTGATACTGAGTACGAAATCAGCCTGTTTGCACTCAAAGGTCTGACGCCTAGCGAGGCAGTTATGGCAATGGAGAAAACCCAGCCTTTAAAATTATCCTTAGAATGTTCTCTTGGTGTGGATGTACAAGCCGACGTTGTTCTCCTGGTCGACGGTTCCTACAGTATCGGTCTTGCGAACTTCGCTAAAGTTCGAGCTTTCTTGGAAGTTCTGGTCAACACCTTTGACATTGGTGCGGAGAAAGTTCAAATCAGCTTGGTCCAGTACAGCAGAGACCCACACACTGAATTCTACCTGAACACCCACCACGATCTGAGCGCAGTGGTCAAAGCCGTGAGAACGTTCCCCTACCGTGGTGGCTCCACGAACACCGGCAAAGCTATGACGTATGTGAGAGAGAGGATTTTTGTTCCAACCAGAGGCGCTCGTGCAAATGTACCTCGTGTTACGATTCTGATCACCGATGGGAAGTCCTCGGATGCTTTCAAAGACCCGGCAGCTAAGCTTAGGAACTCGGATGTAGAGATTTTCGCAGTGGGCGTGAAAGATGCTGTCCGCTCGGAGCTGGAGGCGATTGCTAATCCTCCAGTGGAGACCCACGTGTACACCGTAGAGGACTTTGATGCTTTCCAGAGGATTTCTGACGAGCTAACCCAGTCCATCTGTCTGAGAATTGAGCAAGAGCTTCTGAACATCAAGAAGAGAAGTCTGATTGCACCCAGGTCTCTGACCTTCTCAGAGGTGACCTCCAGGAGTTTCCGAGCTTCTTGGGTAACAGATGCCGTGGATGTGCAGTCCTATCTGGTGCAATACAAGCCTGATGCTGACACAGAAGTGGGCTACATCTCCGTTTCTGTGCCGGGAGACACCACTACGGCTGTCTTACATCACCTTACTCCAGTCACAAAGTATGAGGTCAAGGTTTACGCCCAATACGAGAAGGGAGAAAGCTTTCCTCTATCAGACTTTGAGACCACACTAGAAGAACAAGGATCCGTGAACAACCTGAGGGTGTCCGAGGAGACCACAAATAGTTTCCGTGTCTCATGGGGGGAGGCTCCTGGTCCAGTAGTGCGGTATAAACTCACATACTATGGTCCACCTCGAGGGGATATAACGTTAAAAGAAACTGCAACAGTTGGCCCTGAGACCACCATAGTTCTGCAGCCACTTCAATCAGCTACGAAATACCGTGTCTCTGTGGCAGCCGAATACCCATCAGGTGTTGGACCTCAGATGCAGATTGATGGAACAACCAAAGAAGAACGTGGCTTGCCGAGAGACCTGCGTGTTTTTCAAGAGACGGTGTCATCCATGCAGCTGTCCTGGGCCGCGGCACCAGGAAGAGTCATTCAGTACCGCGTGTTCTACCAGCCCACAGAAGGTGGTGAGATGAAGGAAGTGACTGTTAGGGGGGACGCCACAGCGACCACGCTGAAGAATCTCCAGCCGGGCACAGAGTACCAGCTTGCTGTGAGGGCACGCTACTCCTCAGGATTAGAAGAGCCACTCCAGGGAACTGGAACCACACTGGAAGCCCAGATAAACAGCTCACAGGTCTTCTGGGGTTTCAGAAGACCAAATCTTAAGCTACAGTATCCTCTAATGAAATTACCAGAAGCAAAGCTTGCCCAAGATCTTAAATCACAGAATTCCGGATATGCATTAAGGAAGAGCATGAAAGATTTCCGTTCTGTCCCCAGTCTGATGCAGAAGCGTGTAATGCGTTCAAGCTGGTCTTGCTGTCCGGCCCATGAACCCGGAGATGTACGTAAAGCACAGATGAAGGGGACAACCGAAAGCTCTTTCAGCACCTGCGCTTTCCCGGTGATTGACACGAGGTTAAACTTCAAAAACACTGCAGAAAATTTACTGCATGTGTATGGCCTGTCTCAGCTTTGGATTTTGGAGAAGCATGGGATGCTGGATTGGCTTTTTGAATGGAATTGCATCTTTAAATGGATATAAAAGATCATTTGAATTTCAAGGCTCTTTTAAAGGCAGAGTCCAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_06666877_06679215.mRNA True 3194 mRNA 0.49 15 6666830 6679215

Neighbor

gene id symbol gene type direction distance location
CI01000029_06606850_06665941 NA coding downstream 680 6606850 ~ 6666150 (-)
CI01000029_06486658_06492567 NA coding downstream 174263 6486470 ~ 6492567 (-)
CI01000029_06449255_06451786 NAA20.S, NAA20, RIN2 coding downstream 215044 6449112 ~ 6451786 (-)
CI01000029_06431763_06439215 NA coding downstream 227615 6431720 ~ 6439215 (-)
CI01000029_06410464_06420256 CFAP61 coding downstream 246574 6410022 ~ 6420256 (-)
CI01000029_06689615_06698873 NA coding upstream 10322 6689537 ~ 6698873 (-)
CI01000029_06719634_06722376 NA coding upstream 40312 6719527 ~ 6723172 (-)
CI01000029_06739098_06769987 NA coding upstream 59499 6738533 ~ 6769987 (-)
CI01000029_06798103_06806327 EXTL3 coding upstream 118825 6798040 ~ 6806846 (-)
CI01000029_06832914_06833074 NDUFB1 coding upstream 153494 6831854 ~ 6833074 (-)
G156362 NA non-coding downstream 70130 6596489 ~ 6596700 (-)
G156359 NA non-coding downstream 88337 6578261 ~ 6578493 (-)
G156358 NA non-coding downstream 88646 6577901 ~ 6578184 (-)
G156357 NA non-coding downstream 90844 6575727 ~ 6575986 (-)
G156345 NA non-coding downstream 127509 6538523 ~ 6539321 (-)
G156322 NA non-coding upstream 3476 6682691 ~ 6687634 (-)
G156332 NA non-coding upstream 9537 6688752 ~ 6689050 (-)
G156380 NA non-coding upstream 81849 6761064 ~ 6761314 (-)
G154415 NA other downstream 1679405 4986108 ~ 4990990 (-)
CI01000029_04460778_04463540 FKBP1B other downstream 2189618 4460159 ~ 4463540 (-)
CI01000029_03698769_03707177 NA other downstream 2959578 3698572 ~ 3707883 (-)
G153891 NA other downstream 3380276 3248777 ~ 3286554 (-)
CI01000029_02589994_02592379 NA other downstream 4074028 2587549 ~ 2592379 (-)
G156542 NA other upstream 491152 7170367 ~ 7170951 (-)
G156495 NA other upstream 687112 7365007 ~ 7371921 (-)

Expression


Co-expression Network