CI01000029_06739098_06769987


Basic Information

Item Value
gene id CI01000029_06739098_06769987
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 6738533 ~ 6769987 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_06739098_06769987.mRNA
GTTTTTGCATATGATTATTGCTTCTGGTCTATGGATGAGGCTGAAGCGGCCAAGTTTGCAGGTCAGGATGTGGTGTTTCAGTGTCTTGGAGTGAGTCTTCTGGACAGCGCTTTTCTAGGATACAACGCCTGTATATTTGCATATGGGCAAACAGGCTCAGGAAAGTCATACACGATGATGGGAACGGCCGAGCAGCCGGGTCTGACCCCGCGTCTGTGCAGCTCTCTGTTTGAGCGCACCGTACAGGAGCAGAGGGAGGGCGAGAGCTTTACCGTGGAGGTCTCATACATGGAGATCTACAACGAGAAGGTGCGAGACCTTCTAGATCCCAAAGGGAGCCGGCAGGCGTTGAGGGTCCGGGAGCATAATGTGTTGGGGCCGTATGTAGATGGTCTGTCCCGTCTCGCTGTGACCAGTTACAAGGACATCGAGTCTCTGATGTCGGAGGGGAATAAATCCCGTACTGTGGCGGCCACAAACATGAACGAGGAGAGCAGTCGATCACACGCCGTCTTCAACATCGTTCTAACGCACACGCTCAGAGACCTGAAGACTGGGACGAGTGGAGAGAAGGTGAGTAAACTCAGTCTGGTGGATCTGGCCGGCAGTGAAAGAGCAGATAAAACTGGAGCTGGAGGAGAAAGACTCAAAGAAGGCAGCAACATTAACAGGTCTCTCACGACTCTCGGTCTGGTGATTTCGGCATTGGCGGAGCAGGGCGCAGGAAAAAACAAGAGTAAATTTGTTCCTTACAGAGACTCAGTGCTCACATGGTTACTGAAGGACAGTTTAGGAGGCAACAGTCGTACAGCTATGGTTGCCACGGTGAGTCCAGCAGCCGACAACTACGACGAGACTCTGTCCACACTACGGTACGCCGACCGGGCCAAAAGCATCGTTAATCACGCTGTGGTTAACGAAGATCCAAACGCCAGAATCATCAGAGAGCTGAGAGAAGAGGTGGAGAAACTGCGCAGCCAGCTGACCGAGGCTGAGTCAATGAAAGCTCCTGAGCTCAAAGAGAGACTAGAGGAGTCCGAGAAGCTGATCCAGGAGATGATGGTGAGCTGGGAGGAGAAACTCAGGAAGACGGAAGAGATCGCACAGGAGCGACAGAAGCAGCTGGAAAGTTTGGGAATTTCTCTGCAGTCGTCTGGGATCAGAGTCATTGATGAAAAATGCTTCCTGGTCAATCTGAACGCAGACCCCGCCCTCAACGAGCTGCTTGTGTATTACTTAAAGCTGCATCATGGGGATCGAATCCTGTGGGGAAACAACCACTTCTTCAGGATCAGCGTGTCTAACGCGTATCGTGTTGGCGTGGAGGATGAGGAAGGGTCGACGATGAAGGCTGGTCTTCACCCCGAGTGTCTAGATGTGGATATAGATCGTCTCAGTCACGGCTCCAATGACACTAGCTTCAGTTTTGAGTCTGCACAGACAGAAGTCATGATGAAAGCTCTGGGAAACAACGACCCGATGCAGTCAGTGCTTCATTCTCTGGAGCGCAGACATGAGGAGGAGAAGCGTTCGGCTCTGGAGCGTCAGCGGCTGATGTACGAGCAGGAGCTGCAGCAGCTGCGCAAACGTCTGTCATCAGAGCTGCAGACGCAGGGATCTCATCCACAGCACCACCGAAGCAGCGAGAATCTCAACGTGAGCTCGGTCTCCTCACAGAGCCGACTGCACCAGTGGAGTGAGGAGAGGGAGGCTTTGATGAGCCGAACTCTGCGTAAGCTCAGAGAACAGATCGTGAAGGCCAATCTGCTGGTGCAGGAGGCTGGATTCATCTCTGAAGAGCTCAACAAGAAAACAGAATATAAAGTCACACTGCAGATACCTGCTGCCAACCTCAACGCCAACCGCAAGCGGGACACGGTTCTGAGCGAGCCGGCGGTGGAGGTGAGGAGGAAGGGTAAAGGGAAGCAGATCTGGGCCATGGAGAAGATGGAGAACCGGCTGGTGGACATGAGAGAGCTCTACCAGGAGTGGAAAGACTATGACGAGGACAATCCTGTCATGCGTTCCTACTTCAAGCGTGCCGATCCGTTCTTCGACGAGCAGGAGAATCACAGTCTGATCGGTGTGGCGAACGTCTTCCTGTCCTGTCTGCTGTACGACGTCAAGCTGCAGTACGCAGTACCCATCATCAACCAGAAGGGGGAGGTGGCAGGTCGTCTTCACGTAGAAGTCGAGCGTCTGAGTGGAGAACTGGAGGATCGTGAGACGGGGGGCGGGGACTCTGACATCAGTCCGGACGGCGAGACGCAAGAACGCAAACTTACCTGCATGATCAAGGTGTTGCAGGCGACAGGACTACCTCAGCACCTCTCAAACTTCGTGTTCTGTCAGTATTATTTCTGGGAGCAGAAGGAACCCGTGTTTATTGCTCCGGAGGTCGGCCTGACCGCTCCTAGCAGCAGAGAGCCGCAGTCTCTGGTGTTGTTTGACAACTGCAAGAATCTGGAAGTGACCGTAACTGAAGACTTCCTGGAGTTTCTGACGGAGGGAGCTGTGGCTGTTGAGGTCTATGGACACAAACAGGCAAACCCGCGCAGGAATCTGGCTCTCTGGGACCTTGGGGTGATTCAGGCGAAGACTCGCTCTCTCAGAGAGAGGTGGAGTGAAGTGACCCGCAGGCTGGAGCTCTGGGTGCAGATCCTGGAGCTGAATGATGCTGGAGAGTTTGTGCCGGTGGAGGTTCAGCCAGCTAAGGACGTGTGCACAGGAGGAATCTTTCAGCTTAAACAGGGTCAGTCCAGGCGTGTTCATGTGGAGATTCGTTCAGTCCAGGACTCCGGCACCATGCCTCTGATCACGGAATCTGTGCTCAACATCTCCATCGGCAATGTGGAGGTCCATCAGAGGGTGGGAGATAAAGACGTGGACAGTTATCAGGAGTTTGATCTGGAGAGACTGAGGGCCCAGTGGCTCATGGCTCTAACTGAACGACAGGAGTATCTGGACCAACGTCTCCAGAAACTTGTTGGCAAGCAAGATAAGTCAGAAGAGGACGTGGAGAGCGAGTCCCAGCTGCTTGAGTGCCGTCTGACACTAACGGAGGAGAGAAATGCTGTACTGGTGCCCTCTGCTGGCAGCGGTATCCCAGGAGCCCCTGCGGAGTGGGTTCCTGTGCCTGGAATGGAGAGACACATCCCAGTCATCTTCCTGGACCTCAGCGCTGATGACTTCTGTGATCATCTGTCCGCTCCTCTGGCTGGAGGTCTGGATGCTGTGCTGAACAGAGAAGATAAAGATGATTTCATAGATTTACAGATAGTCAAACACCATGAGAATGAGGTGAAGGCAGAGGCATCATGGGACTGCACCGTTCACAATAGTCCTGAGCTAAATCGAGCAACAGGGCAGGATCAGAGGGTTTATCTCACCATCCGCATCGTCGTTCTGCTCAGTCATCCTGCACAAATGCAGCTGGTCCTACGCAAACGCATCTGTGTGAACCTCACCGGACGACAGGACATGCAGGGCTCTGAGGACAGGGAGATGCTCGCCCGACTGGCCACCAGCACTGACAACCTAGGAACTGACAGTGAAGCCGCCATTGAGAAATACCTGCGGAGTGTGTTAGCCGTGGAGAACATCCTCACGCTTGACCGTCTCAGACAGGAGGTTTCAGTAAGGGAACATCTGACAGATAAAGGAAGGATTCCCAAACGCTGCCTCAGTTCACCCAATGTACACCGGGGTGTTTGGGACAGTCAGCAGGAAATTAATGTGCCAACATCATCCCCATCTCACTCACCATCAATACAAAGTCCAAACTCAGAGCCAGGTCTCTCAGGATTTGCTGCATCTTATTTCTCCCCAGTAAAAGCTCTAGTGTCTCCAGTACCCAAGATGTTCAAGTCTCTGTTATCCAAGAAAGATGAGAAGAAAGAGCCACCTCCTCCTGCTGCCTTTGAGCAGACTCCAGTGGCTCCTTCAGAAGACAGTGCTCAAGACAGCCAATCAGAATCTGCTTCCTTTGTGCCCATATTTCCGGTTATTCCCAATGGAGTAGAGACCGCTAAGGCATCCAGCATTTCCTCAGAAACCACGTCTGACATCCAGATAAGCCATGCTATGGAAACCCCAATTTCAGAGAAACCAGAAAACGTTAAGGAGATTCTGCCTCTTCTTCCTCAAGAAGTGCCACTTATTTCTGTTCCTCCAGTAGCTGAGGACGTTTTACCTACTAATTGTTCTTTTGAACTTGAGGAAGTTCTTCCTCCATCTGTTTCTCCAGAGGATGAGAACGTTCTGCCTTCTAATCTTATTCCAGAGGTTGAGGAGGTTCTACGTCCATCTGTTTCTCCAGAGGTCAGAGAGGTTCCACCTCTTTCTGTTCCTTCAGAATCTGAAGAGGCTCTACCTCCTACTGTTCCTTCAGAGATCGAGGAGGTTTCACCTCCTCCTGCTTCTCCGGTAGACCCCAAGCAAAGCTTAGTTGGTGATTCCACCTACAGCTCCATCAGCGATGTCTCAAGTGGATACATCTCCACAAGTGTCTCCACAGCGACTCTCTCTGAGTGTGTGGTCTCAAATATTGATCCTCCTCTTCCCAACAGCACTGAGGCCAAAATAGACAAGTCTGCTTCCAAAAAGATCGAACCAAAAACAGACAATGTGGTGGTTGTGCCAACAAGCAGCACATCTCCAGAGCATGACCAAGCTGACCAAGAACATGGAGAACAGATGTCTACAGAATCCCAGACATCAGAAGAACATGGTCAAGTGTCTCCTCTAGATGTATCTTCCTTGCCCCAAAAAAACAATGAACCCATTGACATTGTTGCTTCAGCCGGCCAAACATCTCATTCAGCCCCATCAGTACCATCTACGTCATTAGCATCACCAGCTGCCTCAAAACCATCTGACCCATCTGTACCAGTGAAGGCTACTAAGCAGTCAGCACCTTCCCATCAATCAAAACCTGAACAAACCATCAAGTTCACTCCAGCTCTCGAATCCCAGACATCAGGAGAACATGTGAAGACTGCTAAGCAGTCAGCAACTTCCCAGCAATCAAGACCTGAGCAAACCAACAAGTCCACTCCTGCTCCCATCGCCAACCCTTTCCAGATCCACAGAGTCAAGTCCTCTGGCCTGAAGTCTTTCAAAGGGATCCTGCATGAGGAAGATGAGGGTAAAACTAAACATGTTGACTCTGCACTGAGTGAGTCTCAAGAGAGACTGGAGATCCTTTCGGATTCAGAGGAAAGCCTTGAGACTCCTGACTGGCTGAAAGAAGGGGAATATGTGACTGTGGGCGCCAATAAAACTGGAACAGTCCGTTACATTGGACCAACTGACTTTGCAAAGGGCATTTGGGTTGGAGTGGAACTTGATGTTCCAGCAGGTAAAAACGATGGTTCGGTCGGCGGTCGCCAATACTTCCACTGCAACCCTGGTTACGGCGTTCTCGTGAAAGCAGATCGGGTCACGAAAGCAACGGGTACCGCTAAAAGGTTGAGGCAGAAACGCAAGCAGAACCTCTCGGGATCTAGCCCCAACCTGGCAGCCCTTACAGCGATGGCCAAAGGAGAGGCTGGAGTACGCAAGGGGGAGAACAGGAAGTCTTGGGTTAGCTGAGAAAAATGTCCATGTACTGAGGACTTACTGGTGCAGCAGCAGTATTGGTACGACACTGAAACACTACACTGATACTTGCACGGATGTAACTGCCATTTGATTTATTAATGCAAATCTACTGTACACTACTTAGTGCCTAGTGTTCGAAAACCCCAATTTTTGCTCTGCATTTCCAGCCTCAATAAGCAGTATTTTTGGTAGTATTTTTTAAAAATGTTTTTTAATATAACAAAGTGCCCTGTTTATCTGGACCCTGTGTCAATGAGTATGTGCATGTGTTGGATTACCTGGAAAAATAAGGATACCGATGGATTCACTGAGTGTTTCAATTCATGATTTTATAGTATATATGGAGGTGAGAGGGTTTTACCTGTGGAGATTAAA
>TU177497
NNNNNNNCTACGCCATTAGAACCACCAGCTGCCTCAAAACCATCTGACCCATCTGTATCAGTGAAGACTGCTAAGCAGTCAGCAACTTCCCAGCAATCAAGACCTGAGCAAACCAACAAGTCCACTCCTGCTCCCATCGCCAACCCTTTCCAGATCCACAGAGTCAAGTCCTCTGGCCTGAAGTCTTTCAAAGGGATCCTGCATGAGGAAGATGAGGGTAAAACTAAACATGTTGACTCTGCACTGAGTGAGTCTCAAGAGAGACTGGAGATCCTTTCGGATTCAGAGGAAAGCCTTGAGACTCCTGACTGGCTGAAAGAAGGGGAATATGTGACTGTGGGCGCCAATAAAACTGGAACAGTCCGTTACATTGGACCAACTGACTTTGCAAAGGGCATTTGGGTTGGAGTGGAACTTGATGTTCCAGCAGGTAAAAACGATGGTTCGGTCGGCGGTCGCCAATACTTCCACTGCAACCCTGGTTACGGCGTTCTCGTGAAAGCAGATCGGGTCACGAAAGCAACGGGTACCGCTAAAAGGTTGAGGCAGAAACGCAAGCAGAACCTCTCGGGATCTAGCCCCAACCTGGCAGCCCTTACAGCGATGGCCAAAGGAGAGGCTGGAGTACGCAAGGGGGAGAACAGGAAGTCTTGGGTTAGCTGAGAAAAATGTCCATGTACTGAGGACTTACTGGTGCAGCAGCAGTATTGGTACGACACTGAAACACTACACTGATACTTGCACGGATGTAACTGCCATTTGATTTATTAATGCAAATCTACTGTACACTACTTAGTGCCTAGTGTTCGAAAACCCCAATTTTTGCTCTGCATTTCCAGCCTCAATAAGCAGTATTTTTGGTAGTATTTTTTAAAAATGTTTTTTAATATAACAAAGTGCCCTGTTTATCTGGACCCTGTGTCAATGAGTATGTGCATGTGTTGGATTACCTGGAAAAATAAGGATACCGATGGATTCACTGAGTGTTTCAATTCATGATTTTATAGTATATATGGAGGTGAGAGGGTTTTACCTGTGGAGATTAAAAGTGCCAGACAGTTTTATTCATAAATGATTGTGTTTTTAGTGTTATTATGGTGAATTAGTTCTGTATTTTCTCTTGGTTTTGGTACCTTTGTATTTTGTTTCTTTTTAATTGAGTAATTTATCATCAAATTATTTAATTTATTTTGCAGATCAAAGTAATGACAAAAAATAATAATGTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_06739098_06769987.mRNA False 5976 mRNA 0.51 35 6738714 6769987
TU177497 True 1228 lncRNA 0.43 2 6738533 6741055

Neighbor

gene id symbol gene type direction distance location
CI01000029_06719634_06722376 NA coding downstream 15542 6719527 ~ 6723172 (-)
CI01000029_06689615_06698873 NA coding downstream 39841 6689537 ~ 6698873 (-)
CI01000029_06666877_06679215 NA coding downstream 59499 6666830 ~ 6679215 (-)
CI01000029_06606850_06665941 NA coding downstream 72564 6606850 ~ 6666150 (-)
CI01000029_06486658_06492567 NA coding downstream 246147 6486470 ~ 6492567 (-)
CI01000029_06798103_06806327 EXTL3 coding upstream 28053 6798040 ~ 6806846 (-)
CI01000029_06832914_06833074 NDUFB1 coding upstream 62722 6831854 ~ 6833074 (-)
CI01000029_06921800_06922750 TMEM121A, TMEM121B, TMEM121 coding upstream 151294 6921281 ~ 6923115 (-)
CI01000029_07332828_07336542 ATP6V1D coding upstream 562308 7332295 ~ 7336542 (-)
CI01000029_07346183_07362585 RBM25.S, RBM25, RBM25B coding upstream 576078 7346065 ~ 7362585 (-)
G156332 NA non-coding downstream 49664 6688752 ~ 6689050 (-)
G156322 NA non-coding downstream 51080 6682691 ~ 6687634 (-)
G156362 NA non-coding downstream 142014 6596489 ~ 6596700 (-)
G156359 NA non-coding downstream 160221 6578261 ~ 6578493 (-)
G156358 NA non-coding downstream 160530 6577901 ~ 6578184 (-)
G156396 NA non-coding upstream 82137 6852124 ~ 6852324 (-)
G156400 NA non-coding upstream 90967 6860954 ~ 6861244 (-)
G156401 NA non-coding upstream 91444 6861431 ~ 6861757 (-)
G156410 NA non-coding upstream 112600 6882587 ~ 6886699 (-)
G154415 NA other downstream 1751289 4986108 ~ 4990990 (-)
CI01000029_04460778_04463540 FKBP1B other downstream 2261502 4460159 ~ 4463540 (-)
CI01000029_03698769_03707177 NA other downstream 3031462 3698572 ~ 3707883 (-)
G153891 NA other downstream 3452160 3248777 ~ 3286554 (-)
CI01000029_02589994_02592379 NA other downstream 4145912 2587549 ~ 2592379 (-)
G156542 NA other upstream 400380 7170367 ~ 7170951 (-)
G156495 NA other upstream 596340 7365007 ~ 7371921 (-)
G156380 NA non-coding upstream 20009 6761064 ~ 6761314 (-)

Expression


Co-expression Network