CI01000029_08318488_08338631


Basic Information

Item Value
gene id CI01000029_08318488_08338631
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 8318488 ~ 8339359 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_08318488_08338631.mRNA
AAACGAGAGAAGAGGAAGCATGAGAAGATACTGAGTGAGGAGCTTTACCCCGCCATCACAAACCTCAACCAGTTTCTCCCGCCGGAGCACGGCATCGAGTACATCGCCTGGGACATGGCCCGATACACCAAGAGTAAACTGTGTAACGTGTTGGACCGTCTCAGTATGATCGCTGAGAATGTGGTGAAGAGGACGGGCTTCTTCGTTAATCGACCCGACTTCTATTGCCACACGTTACGTCCTGATGAAAGCACTTGTTGCTGTAAAACTGCTGATGGTCCACGTGCTGAAGCACTGATTCGTTTTCAAAACAACACAGCTGCCGTGTTACACATGAGGTGGCGAGATCTCGGAGGGAAGGTCACACCCAATGGCAGGTTACAGACGGGGGTTTTGAGGACGAACTGTGTGGACTGTCTGGACCGAACCAACACTGCCCAGTTCATGGTGGGTAAATGCGCTCTGGCGTACCAGCTCTACGCGCTCGGGATGATCGACAAACCCAAGCTTCAGTTTGATACGGACTGTGTCAGATTATTTGAGGAGCTGTACGAGGACCACGGCGACACGCTGTCTTTACAGTACGGAGGATCTCAGCTGGTTCACCGAGTGAAGACGTACCGTAAGATCGCGCCCTGGACGCAGCACTCCAAAGACATCATGCAGACGCTCTCGCGCTACTATAGCAATGCATTCTCAGATGCAGACCGACAGGACGCTATAAACCTGTTCCTGCAGGTCTTCCAGCCGTCCGAATCGAAGCCTCACCTCTGGGAACTGCCCACAGACTTCTACCTTCACCACAGTAACACCATGAGCCTCCCGCTCCAGCGACACAGGTTCTCTACGCTCTACTGCTTACTTCTGTATCTGACTGAGATTTCATGTTACACGCACTGGTGGTCTGACGGAGTGCTGACGTACCTCCCGTTACCGTATGATGAAGCCCAGTGTGAGAACAACAGAAAGAAGGTTGTGGTGAAGCGTGTGAACAGATTTGACGAGAGCATCGACATCTACACAGAGTTTTTCAAGCCGTACGAGCTCACTTCATTCGACGACACTTTTAGTATCGCCATGACTAACTCCGCAAGGGAGTTCATGCCGAAGACCGTCGGGCTCGATCCCAGTCCGTTTACTGTTCGCAAACCAGATGAGAGCGCAAAGTCTGTGCTGGTGTGAGTTTGAGATATTTGCTCTGTAATTTATTAAGTGCATGGCCCTCTTTATTGTTAGAAAAGCTGTTTTCACCATGTTTTTGTGTGACGTTTAAAAAGGACTTATTCTGCTTTTTTCCATGTTCATCTTTTTAGTGTGTAATGTTGCTTTTTGAGCATGAAAAAGCTCTGCAAAGTTCCAGTTCTTCTCTATATCAGTGTCAGTGTTTCTGAACTCCCTTGTAGTCTTGAGTTTTCTTCACAATATTCCTCATTTAAATAATTCATATGCAGAATAAAGGGGCGGGGCCTGATTGAGTTAGTTAGTAGTGTGTTGAAACTGGCGGTTATGGTGAGGGGCGGGACATGTCCCAAACACCAATCACAACACACTGCTCCAGCCGACCAATCAGAGCACATTGTGCTTTTCAGAAGGAGGGCCTTCGTAGAGACAGGAACTAAACAGAGCGTTACTGACAGACTGGGAAGCGAGGAGCTGCAACAATGGAGAATATGTGAAAAATAATATGCCCTCTTTAAGAAAAACACAAACCAGACAGTGACCCTTTCTGCTGGAAAACCAATCACTGATTCGACACACGCTTGCCTGCATGTGCTCATGTTTTCTAGCGTGTGAATATTTAGCGTGCAGCAGCAGCTGTCTGATGTTGTTCAGGTGTGAACGGGAATCTCACAGGTCGACATTATGTACTTGAAAACAAGTTGATTTTTGCTTTAATATGCATTTATATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_08318488_08338631.mRNA True 1910 mRNA 0.48 10 8318488 8339359

Neighbor

gene id symbol gene type direction distance location
CI01000029_08288440_08301175 NA coding upstream 17131 8288440 ~ 8301357 (+)
CI01000029_08198433_08203489 NA coding upstream 114950 8198365 ~ 8203538 (+)
CI01000029_08156225_08174249 SLC22A23 coding upstream 143352 8155914 ~ 8175136 (+)
CI01000029_08140259_08140582 NA coding upstream 177543 8140175 ~ 8140945 (+)
CI01000029_08072926_08079001 PHACTR1 coding upstream 239376 8072926 ~ 8079112 (+)
CI01000029_08346604_08357224 NA coding downstream 7042 8346401 ~ 8357633 (+)
CI01000029_08367350_08368348 GPR6 coding downstream 26985 8366344 ~ 8368514 (+)
CI01000029_08425310_08441838 NA coding downstream 84438 8423797 ~ 8441847 (+)
CI01000029_08443106_08447917 CDC40 coding downstream 103599 8442958 ~ 8447917 (+)
CI01000029_08484998_08502958 NA coding downstream 145593 8484952 ~ 8503169 (+)
G155720 NA non-coding upstream 69775 8248489 ~ 8248713 (+)
G155725 NA non-coding upstream 72998 8244999 ~ 8245490 (+)
G155723 NA non-coding upstream 75683 8242311 ~ 8242805 (+)
G155724 NA non-coding upstream 76860 8241175 ~ 8241628 (+)
G155722 NA non-coding upstream 77829 8240376 ~ 8240659 (+)
G155753 NA non-coding downstream 34675 8374034 ~ 8374329 (+)
G155757 NA non-coding downstream 38712 8378071 ~ 8378290 (+)
G155758 NA non-coding downstream 42226 8381585 ~ 8381784 (+)
G155769 NA non-coding downstream 43509 8382868 ~ 8384341 (+)
G155809 NA non-coding downstream 102781 8442140 ~ 8442351 (+)
G155627 NA other upstream 386311 7931480 ~ 7932177 (+)
G155522 NA other upstream 680654 7634833 ~ 7637834 (+)
CI01000029_06906861_06907157 NA other upstream 1411056 6905834 ~ 6908633 (+)
G155083 NA other upstream 1828194 6431535 ~ 6490294 (+)
G155079 NA other upstream 2030090 6282685 ~ 6288398 (+)
G156007 NA other downstream 625459 8964818 ~ 9064541 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_017746 FIG4 coding NC_007131.7 CM002904.2 53181017 ~ 53262310 (+)