G153504


Basic Information

Item Value
gene id G153504
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 3571151 ~ 3571432 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU174330
TTTCATCTTACGCAGGCACAGAACGGACGTGCTACTTGGCCGTCGGCTGTCGAGTGTCGGTTTGGTGTGTCAGGGCAACTTTGGATCCAGACGCTGCCGACGTGAGCCAACCCCGCAGTCTGCTTTGGTCGCCACTAGTTCGTTGGCGTCGGCTTGGTGTGTTCCTGCCTTTAGAAATCAGCAATGGTGAGAGAACATTGTGCTTGGTACATTTTTTGTCTGCAAACCAAACTTAGGTCTTCAGACAAAAAATATTTTAATCCTGGCTAGCACACTTCCCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU174330 True 282 lncRNA 0.50 1 3571151 3571432

Neighbor

gene id symbol gene type direction distance location
CI01000029_03511828_03527110 GOPC coding upstream 42413 3511828 ~ 3528842 (+)
CI01000029_03499444_03499713 NA coding upstream 70965 3499193 ~ 3500186 (+)
CI01000029_03324084_03378615 CEP85L coding upstream 192536 3324084 ~ 3378615 (+)
CI01000029_03291762_03308373 NA coding upstream 262358 3291762 ~ 3308793 (+)
CI01000029_03266557_03286137 NA coding upstream 285006 3266483 ~ 3286145 (+)
CI01000029_03640782_03646346 NA coding downstream 69350 3640782 ~ 3646364 (+)
CI01000029_03649051_03684709 IGF2R coding downstream 77619 3649051 ~ 3684880 (+)
CI01000029_03689026_03697933 SLC22A2 coding downstream 117594 3689026 ~ 3698074 (+)
CI01000029_03708374_03721140 NA coding downstream 136942 3708374 ~ 3721140 (+)
CI01000029_03830894_03838298 NA coding downstream 258175 3829607 ~ 3838325 (+)
G153466 NA non-coding upstream 74629 3496291 ~ 3496522 (+)
G153430 NA non-coding upstream 80778 3396845 ~ 3490373 (+)
G153461 NA non-coding upstream 86772 3483944 ~ 3484379 (+)
G153449 NA non-coding upstream 114533 3454310 ~ 3456618 (+)
G153505 NA non-coding downstream 409 3571841 ~ 3572070 (+)
G153509 NA non-coding downstream 17270 3588702 ~ 3594323 (+)
G153513 NA non-coding downstream 31158 3602590 ~ 3602834 (+)
G153491 NA non-coding downstream 127050 3698482 ~ 3731627 (+)
G153492 NA non-coding downstream 178880 3750312 ~ 3984500 (+)
G153475 NA other upstream 9147 3545125 ~ 3562004 (+)
G152451 NA other upstream 808212 2761594 ~ 2762939 (+)
CI01000029_01526863_01527414 NA other upstream 2043252 1526754 ~ 1527899 (+)
G151495 NA other upstream 3199229 366541 ~ 371922 (+)
G151415 NA other upstream 3345906 170521 ~ 225245 (+)
G153790 NA other downstream 1162157 4733589 ~ 4740107 (+)
G154587 NA other downstream 1699588 5271020 ~ 5271535 (+)
CI01000029_05461497_05468985 BATF other downstream 1885809 5461497 ~ 5470346 (+)
G155079 NA other downstream 2711253 6282685 ~ 6288398 (+)
G155083 NA other downstream 2860103 6431535 ~ 6490294 (+)

Expression


Co-expression Network