G156345


Basic Information

Item Value
gene id G156345
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 6538523 ~ 6539321 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU177516
AAAAAAGCCCTCCTATAGTTTGCCAAGGCCCATGCTGACAAAGATGAAGACTACTGGGACTCTATACTCTCGAGTGATGAGACCAAGATGAATGTTTTTGGAACTGATGGCTTCAAAACTGTATGGTGAGGAATACAAAGAAAATGGCATCATGAATTCACAGATGTACTGCTCTATACTAAAAGAGAAGATGCTACCATCACTCCATGCCCTTGGTCGTTGTGCACTTTTCCAACATGACAATGATCCTAAACACACATCTAAAGCCACTGTTGGATTTCTGAAGAAGAACAGGGTGAAAGTGATTCAGTGGCTCCTGATCTGAACCCAGTCGAACACCTATGGGGAATTCTGAAGAGACAAGTTGAGCATCACTCTCCATCCAGCATCCAGTCTCTAAAAGAGGTCATTCTTGAAGAATGGAAAAAGATAGATGTTGCAAAATGTCGCCAACTTGTTCATTCCATGTCTAGAAGACTTGGTGCTGTCAATAAAAATCATGGAGGCTAAACAAAGCACTAGATGTAGTAGTTTTTGTTGTGGGGTGTACTCATTTTTGCATCACACTAATCAGAATCAGAATCAGAATGAGCTTTATTGCCAGGTATGTTTACACATACGAGGAATTTGTTTTAGTGACAGAAGCTCCACAGTGCAACAGAATGACAGCGACAATACAAGACACAGATAATAAAAGAATAAAAGAATAATATACAAATATACAAGATAGACAATGTGCAAAATAGCAAAAAAACACAATATATAATATAGACAATTTTGTATGTAATTTGAGTAAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU177516 True 799 lncRNA 0.38 1 6538523 6539321

Neighbor

gene id symbol gene type direction distance location
CI01000029_06486658_06492567 NA coding downstream 45956 6486470 ~ 6492567 (-)
CI01000029_06449255_06451786 NAA20.S, NAA20, RIN2 coding downstream 86737 6449112 ~ 6451786 (-)
CI01000029_06431763_06439215 NA coding downstream 99308 6431720 ~ 6439215 (-)
CI01000029_06410464_06420256 CFAP61 coding downstream 118267 6410022 ~ 6420256 (-)
CI01000029_06406402_06408397 INSM1A coding downstream 130126 6406069 ~ 6408397 (-)
CI01000029_06606850_06665941 NA coding upstream 67529 6606850 ~ 6666150 (-)
CI01000029_06666877_06679215 NA coding upstream 127509 6666830 ~ 6679215 (-)
CI01000029_06689615_06698873 NA coding upstream 150216 6689537 ~ 6698873 (-)
CI01000029_06719634_06722376 NA coding upstream 180206 6719527 ~ 6723172 (-)
CI01000029_06739098_06769987 NA coding upstream 199393 6738533 ~ 6769987 (-)
G156285 NA non-coding downstream 153514 6384761 ~ 6385009 (-)
G156266 NA non-coding downstream 268403 6269919 ~ 6270120 (-)
G156249 NA non-coding downstream 460891 6076162 ~ 6077632 (-)
G156222 NA non-coding downstream 568308 5969997 ~ 5970215 (-)
G156219 NA non-coding downstream 581327 5956866 ~ 5957196 (-)
G156357 NA non-coding upstream 36406 6575727 ~ 6575986 (-)
G156358 NA non-coding upstream 38580 6577901 ~ 6578184 (-)
G156359 NA non-coding upstream 38940 6578261 ~ 6578493 (-)
G156362 NA non-coding upstream 57168 6596489 ~ 6596700 (-)
G156322 NA non-coding upstream 143370 6682691 ~ 6687634 (-)
G154415 NA other downstream 1551098 4986108 ~ 4990990 (-)
CI01000029_04460778_04463540 FKBP1B other downstream 2061311 4460159 ~ 4463540 (-)
CI01000029_03698769_03707177 NA other downstream 2831271 3698572 ~ 3707883 (-)
G153891 NA other downstream 3251969 3248777 ~ 3286554 (-)
CI01000029_02589994_02592379 NA other downstream 3945721 2587549 ~ 2592379 (-)
G156542 NA other upstream 631046 7170367 ~ 7170951 (-)
G156495 NA other upstream 827006 7365007 ~ 7371921 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
tiger barb (Puntius tetrazona) G25240 NA non-coding NC_056702.1 CM032071.1 1991992 ~ 1993756 (-)