G155429


Basic Information

Item Value
gene id G155429
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 7308832 ~ 7309508 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU176483
CTGTGTCAAAGGCAGCAGACAGATCCAGCAAGATTAGTACTGATGATTTGGAAGCTGCTCATGCCAGTCTCTGAGAGCAGAGCAGTCTCAGTTGAGTGTCCACTCTTGAAACCAGACTGGTTGTTGTCCAGGAGGTTGTTCTGTGTGGGATAAGTAGACAGTTGGTTGAACACAACTCTCTCAAGTGTCTTTGCAATGAATGGAAGAATGGATACCGGTCTGTAGTTTTCTAAAAGTGCTGGATTTAGAGTGGGTTTCTTAAGCAGTGTGGTTATCCTAGCCTGGTTAAATGCTTTAGGAAATGTACCAGTGTGAAGAGAAGTATTAATAACGTGAATGAATGCAGGTACAGTTGAAGAAGAGATGAGATGAGGATGAGTGGGGATAGGATCAAGCGGACAGGTAGTTGGGTGATTGGAAAGAATGAGTTTGGAAACTTCTGCCTCCGAGAGCGAAAGAGGGGAGAACGTGTTTGTTTGCAGTTAAAGGTGCAGTAAGTGGTATTTGAACTACGCTGTTGGACATTGTTGATATTTGAAATCAACCCAAACAAACACACCCTTCTCTTCATTGCTCCACCTCCAAAACTCATTCTCCAATCCTAACCACCCTGCTCTGAGTCGGTTTCAAACCCCAACCCGATCGCTGCTGGCATGCGAGGCGAATGCACTACCGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176483 True 677 lncRNA 0.45 1 7308832 7309508

Neighbor

gene id symbol gene type direction distance location
CI01000029_07252129_07298828 GPHN, GPHNA, GPHNB, GPHN.L coding upstream 8986 7252129 ~ 7299846 (+)
CI01000029_07214426_07214941 NA coding upstream 93843 7214426 ~ 7214989 (+)
CI01000029_07206718_07211765 NA coding upstream 96424 7205687 ~ 7212408 (+)
CI01000029_07132444_07166752 FUT8B, FUT8 coding upstream 141902 7132444 ~ 7166930 (+)
CI01000029_06923683_06924032 NA coding upstream 384747 6923228 ~ 6924085 (+)
CI01000029_07338994_07342252 IF2A, EIF2S1B, EIF2S1 coding downstream 29486 7338994 ~ 7342742 (+)
CI01000029_07365981_07371241 HSP90AB1, HSP90BB, HS90B coding downstream 56473 7365981 ~ 7371601 (+)
CI01000029_07426889_07428262 TMEM151BA, TMEM151B coding downstream 114931 7424439 ~ 7428443 (+)
CI01000029_07500425_07501888 NA coding downstream 190817 7500325 ~ 7502032 (+)
CI01000029_07503905_07506541 TLR5B coding downstream 194397 7503905 ~ 7506835 (+)
G155342 NA non-coding upstream 100038 7208551 ~ 7208794 (+)
G155417 NA non-coding upstream 109119 7199147 ~ 7199713 (+)
G155412 NA non-coding upstream 123803 7184815 ~ 7185029 (+)
G155402 NA non-coding upstream 132949 7175651 ~ 7175883 (+)
G155391 NA non-coding upstream 234284 7074292 ~ 7074548 (+)
G155431 NA non-coding downstream 1317 7310825 ~ 7311033 (+)
G155444 NA non-coding downstream 71664 7381172 ~ 7381409 (+)
G155453 NA non-coding downstream 92555 7402063 ~ 7403009 (+)
G155454 NA non-coding downstream 93537 7403045 ~ 7404232 (+)
G155455 NA non-coding downstream 107660 7417168 ~ 7417511 (+)
CI01000029_06906861_06907157 NA other upstream 401400 6905834 ~ 6908633 (+)
G155083 NA other upstream 818538 6431535 ~ 6490294 (+)
G155079 NA other upstream 1020434 6282685 ~ 6288398 (+)
CI01000029_05461497_05468985 BATF other upstream 1838486 5461497 ~ 5470346 (+)
G154587 NA other upstream 2037297 5271020 ~ 5271535 (+)
G155522 NA other downstream 325325 7634833 ~ 7637834 (+)
G155627 NA other downstream 621972 7931480 ~ 7932177 (+)
G156007 NA other downstream 1655310 8964818 ~ 9064541 (+)

Expression


Co-expression Network