G155444


Basic Information

Item Value
gene id G155444
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 7381172 ~ 7381409 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU176498
CTTTTACCTTTAGACGACAAATTTAAATTTTAAATTCAATATTGATTTAAACAGAACTCTTGAACTAATTTACAGTATGTAACGCAAGTACATTATAAGTAACTGTAATTAAATGACCTAAAAATGAACAGTATAATCCTTTACTTTTTCAAGAATTAAGTAATTTAATTACAATTTACAGTTTACAATTTAATTTACTTAGTAATGCGTTACACCCAACACTGCTTACGGTTTATCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176498 True 238 lncRNA 0.25 1 7381172 7381409

Neighbor

gene id symbol gene type direction distance location
CI01000029_07365981_07371241 HSP90AB1, HSP90BB, HS90B coding upstream 9571 7365981 ~ 7371601 (+)
CI01000029_07338994_07342252 IF2A, EIF2S1B, EIF2S1 coding upstream 38430 7338994 ~ 7342742 (+)
CI01000029_07304652_07330373 NA coding upstream 50716 7304652 ~ 7330456 (+)
CI01000029_07252129_07298828 GPHN, GPHNA, GPHNB, GPHN.L coding upstream 81326 7252129 ~ 7299846 (+)
CI01000029_07214426_07214941 NA coding upstream 166183 7214426 ~ 7214989 (+)
CI01000029_07426889_07428262 TMEM151BA, TMEM151B coding downstream 43030 7424439 ~ 7428443 (+)
CI01000029_07500425_07501888 NA coding downstream 118916 7500325 ~ 7502032 (+)
CI01000029_07503905_07506541 TLR5B coding downstream 122496 7503905 ~ 7506835 (+)
CI01000029_07514095_07516740 NA coding downstream 132597 7514006 ~ 7516742 (+)
CI01000029_07540982_07543852 NA coding downstream 157533 7538942 ~ 7543895 (+)
G155431 NA non-coding upstream 70139 7310825 ~ 7311033 (+)
G155429 NA non-coding upstream 71664 7308832 ~ 7309508 (+)
G155342 NA non-coding upstream 172378 7208551 ~ 7208794 (+)
G155417 NA non-coding upstream 181459 7199147 ~ 7199713 (+)
G155412 NA non-coding upstream 196143 7184815 ~ 7185029 (+)
G155453 NA non-coding downstream 20654 7402063 ~ 7403009 (+)
G155454 NA non-coding downstream 21636 7403045 ~ 7404232 (+)
G155455 NA non-coding downstream 35759 7417168 ~ 7417511 (+)
G155457 NA non-coding downstream 37396 7418805 ~ 7419035 (+)
G155463 NA non-coding downstream 72363 7453772 ~ 7454356 (+)
CI01000029_06906861_06907157 NA other upstream 473740 6905834 ~ 6908633 (+)
G155083 NA other upstream 890878 6431535 ~ 6490294 (+)
G155079 NA other upstream 1092774 6282685 ~ 6288398 (+)
CI01000029_05461497_05468985 BATF other upstream 1910826 5461497 ~ 5470346 (+)
G154587 NA other upstream 2109637 5271020 ~ 5271535 (+)
G155522 NA other downstream 253424 7634833 ~ 7637834 (+)
G155627 NA other downstream 550071 7931480 ~ 7932177 (+)
G156007 NA other downstream 1583409 8964818 ~ 9064541 (+)

Expression


Co-expression Network