CI01000029_07214426_07214941


Basic Information

Item Value
gene id CI01000029_07214426_07214941
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 7214426 ~ 7214989 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_07214426_07214941.mRNA
CTGCAAGAAATATCTGCGGCCTTAACAGCCTTGCAAAGTGGCAAGGCCCCGGGACCCAATGGCTTCCCAATTGAATTCTATAAGAAGTTTTCTACTAAATTAACTCCACTCCTGCTCAATATGTTTGAACATTCTCTGTCTCAAGGAACTCTACCAAAGTCCCTTAGTGAAGCATTGATTACACTGTTATTGAAGCCTGAGAAAGATCCAACACAGTGTAGCTCATATCGACCAATTTCTTTGCTAAATGCAGATATCAAAATTTTAGCAAAATTACTAGCTCTCCGATTAGAGTCTCCCTTAGTCAATATCATTTCAGCTAATCAGGCCGGTTTTATAAAAGGTCTGCATATTTTCTCTAACATCCGTCGCCTCTTAAATGTTCTTTACACCCCTCCATCCCAGGACACCCCTAAAATTGTAGCATCGTTAGATGCCGAAAAGGCATTCGATTGGGTAGAATGGGACTATCCTTTTTTGCTATGGATAGGTTTGGATTCGGCCCCAGATTTATAGAGTGGATCCGTTTTCTCTATACTTCTCCAGTTGCCTCAGTGGTTACTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_07214426_07214941.mRNA True 564 mRNA 0.41 1 7214426 7214989

Neighbor

gene id symbol gene type direction distance location
CI01000029_07206718_07211765 NA coding upstream 2018 7205687 ~ 7212408 (+)
CI01000029_07132444_07166752 FUT8B, FUT8 coding upstream 47496 7132444 ~ 7166930 (+)
CI01000029_06923683_06924032 NA coding upstream 290341 6923228 ~ 6924085 (+)
CI01000029_06906861_06907157 NA coding upstream 307039 6905834 ~ 6908633 (+)
CI01000029_06865685_06903896 SLC24A4, SLC24A4B coding upstream 310530 6865685 ~ 6903896 (+)
CI01000029_07252129_07298828 GPHN, GPHNA, GPHNB, GPHN.L coding downstream 37140 7252129 ~ 7299846 (+)
CI01000029_07304652_07330373 NA coding downstream 89663 7304652 ~ 7330456 (+)
CI01000029_07338994_07342252 IF2A, EIF2S1B, EIF2S1 coding downstream 124005 7338994 ~ 7342742 (+)
CI01000029_07365981_07371241 HSP90AB1, HSP90BB, HS90B coding downstream 150992 7365981 ~ 7371601 (+)
CI01000029_07426889_07428262 TMEM151BA, TMEM151B coding downstream 209450 7424439 ~ 7428443 (+)
G155342 NA non-coding upstream 5632 7208551 ~ 7208794 (+)
G155417 NA non-coding upstream 14713 7199147 ~ 7199713 (+)
G155412 NA non-coding upstream 29397 7184815 ~ 7185029 (+)
G155402 NA non-coding upstream 38543 7175651 ~ 7175883 (+)
G155391 NA non-coding upstream 139878 7074292 ~ 7074548 (+)
G155429 NA non-coding downstream 93843 7308832 ~ 7309508 (+)
G155431 NA non-coding downstream 95836 7310825 ~ 7311033 (+)
G155444 NA non-coding downstream 166183 7381172 ~ 7381409 (+)
G155453 NA non-coding downstream 187074 7402063 ~ 7403009 (+)
G155454 NA non-coding downstream 188056 7403045 ~ 7404232 (+)
G155083 NA other upstream 724132 6431535 ~ 6490294 (+)
G155079 NA other upstream 926028 6282685 ~ 6288398 (+)
CI01000029_05461497_05468985 BATF other upstream 1744080 5461497 ~ 5470346 (+)
G154587 NA other upstream 1942891 5271020 ~ 5271535 (+)
G155522 NA other downstream 419844 7634833 ~ 7637834 (+)
G155627 NA other downstream 716491 7931480 ~ 7932177 (+)
G156007 NA other downstream 1749829 8964818 ~ 9064541 (+)

Expression


Co-expression Network