XLOC_008803


Basic Information

Item Value
gene id XLOC_008803
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 45525122 ~ 45528461 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019072
ccccccacacatcCTTCCATAAATCTATCCATATCCTTCCTATAAAAGCTGCCCATCCATAATGGGAAGGAGCAGATTTGTGGACACGACTTTAACGGGCAGCAGTGAAACAGGATCATGTCCATTTTTAACGTCGTATTGAAAGTCCGAAGTGTTTAACATCTCCAGCGCTGTGCCAAACACAAGGCTTTCTGCTTCCAGAGCTCATTAAAACCACAAAGAACAACAACAAGGCAGTCATCGGCCAATCAGGGGATGTGGCTTCTAAACGTTTTGTCAATGAGAAAGCGATTTCATCTGCAGTCAGTGGCCAATCGTATAAAGGGGGCGTGACTTTTAAGGAAAGTCAATTATGGTAACCTGATATCATGTGATTTTGTATGCGGCGAGTAGCCATTCAGATCTGGAAACGTAGCTTCAAAACATTTGGTTTGCAGTTGGCAGCCAATTATATCAAGGGGGCGTGGCTTTAGAAGAAAGTCAACGATGTCAACCTGATATCATGTGATGTTGTCTGCAGTCATCGGCCTATTCGGTCTGAAGGTGTGGCTTCAAAACGATTGGCCTGCAGTCAGCGGCCAATCATATCAAGGGGGCGTGGCTTTAGAAGAAAGTCAACGATGTGAACCTGATATCATGTGATGTCTGCAGTCAGCACCCAATCAGATCTGAATGTCTGACTTCAAAACGATTGGTCTGCAGTCAGCGGCTAATCAaatcagggggtgtggctttagAAGAATGTCAATGATGTGAACCTAATATCATGTCATGTTGTCTCTAATCAGCGCCCAATCAgatcagggggtgtggctttagAAGAAAGTCAGCAATGTAAACCTGATATCATGTCATGTTGTCTGCAGTCAGTGGCCAATCAGATCTGGAGACATGACTGCAGAATGATTTATCTGCAGTCAGCACCCAATTATATCAAAGGGGTGGGGCTTCAGGTTAATGTAAAAAAGATGCGAGTCTGCAGTCAGCAGCCAAACAGATCTGGAGGCGTGGCTTAACTACGATTCATCATCAATGAGAAAGTTAGACCATCTGCAGTCAGCAGACAATCATTTCAGGGGGCGGGGCGTGGCTTTAGAGAAAGTCAACAATGTGAACCTGATGTTATGTGGCGTGGTCTGCAGTCAGCGTCTATTCAGATCTGGAGGCGTGGCTTCATAATGATTTGTCTGCAGTCACTGGCCAATCATATTAGGGGGCATGGCTTCATAAAAAACATCCTTAATGTGAACCTGATAACATGTAATGTTGTCTGCAGTTGGCGCCCAATCAGAATGGGGGCATAGATTCAATATGATTGGTTATCAATACGAAAGTCATTACCCAATAATGGCAGGGGGGCGTGGCCTCTGACAAACCTGTCATCTGCGATCTGCAACCAATCAAATTAGATAGTTTGGCCAAAATTGTCAAAGGTGCTAAAGGAAAATCATGTAAAGCCAGCTGCAGTAAGCGACCAATGGGAGCAGGGGGTGTGGCTTTAGAAAATCTTCTCATCAATTCGAACTTGAGGTCTTCTGCCATCTGCACCCAATCAGATCAGGAGGCATTGCTTTAGAAGAGTTTACCAGTGACCAGTGAGGAAATTAGTTCATGTGGCATCTTCTGCTGTCAGCGCCCAATCAGATCAAGGGGCGTGGCTTCAAAAGAACTTATCATCTATGCGAAAGTGAGGTCGCGTTACATCGTCTGGATTGATGAAGACGGAAATGGACTTCCCAGGATTCTCCGTGACCAGCTGCTGGAGTTTCTTTGCAAGTCGGTCATCTGGTTGTTGATCAGCTCCTGTTTCAGACAGCGGAGACGGCAGGTTTgagcttccgctgcgccactgaAGCTCAACCGTAAGCCGCGATGCAGCTTTTGCATGCTCGATTGCGCTCCGCAAGTGTTCTGCAGGATCAGAGCGTACAGACGACAACTTTCGTGCATGCAGCATGGCCATGTCATCACTCAGATGCTCTAGCATGTTGCATTGCGGGATGAAGTAATTCGGGCAGGTCTTATTCACCAAGCAGTGCTGCAAGTCGTCAATCAAACCCAGCAAAAAGTGTGCAGCGTAATCTTCCTGCGCCAAATACGTGTGCGGCAGGCGATCGCAGGACCAGAGCATGAGCGAGCGCAGGTGATATGGGCTAATCGCTTTGGGTCGAGATAACAGCTTAATAATCAGAGCTTTACAAGCTTGGTACGCCTGCATCAAACTTGCAGATATGCACTTCTTCAGCTGCACTTCGCTGCGCGCGAAAGACAAACGCCATTCGTTCTCCTTCTGGCCCGTAGACGAGCATGCAGGTAGTAAATAAAACCCACTAATGACTTCCTCCTCTGTAATTTTCCCATCCCAAAAATGGTTTTCCATCAGCCAGCTTTGGGCGACCGCAGGCCAACCTTTGAAGGATACAACTGGAACTACATCATACAACATCCGACTGCCTCCGACGCCCAGGATTATCGAGATGACTGTAGCATTGCGCTCGACTTTTTCAACCCGAGGCACGCCACGCTGTGGCTTCTTCTGGATCTCTGCCAGAACCATGCTAATAGATTCGTAGAACCAATCGGCCACCAGTGTTGGTGAGAAAAAGTAATTGGTTGCGCCATTGGCATGGTCAATCATTGTACAGCAGTCTTTCCACTTATTAATAGTTCCTTCATCAAAAAGCCGCAGACTGAGCCACGAGTGACAGAGCGCTGAATGTCGCATGTCCAGCGTGACCGGCTGATTTCGGTCATGGAGTTTGAGCGCAGGAACCAGCAGCGTGAAGTCCATGTCGTAATCCGCTCCTCGTGCGTACACCGTCAGCTCGTCCAGATCCATGT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019072 True 2841 lncRNA 0.48 3 45525122 45528461

Neighbor

gene id symbol gene type direction distance location
XLOC_008802 NA coding upstream 54954 45465865 ~ 45470168 (+)
XLOC_008801 NA coding upstream 110375 45410623 ~ 45414747 (+)
XLOC_008800 NA coding upstream 279753 45224937 ~ 45245369 (+)
XLOC_008799 NA coding upstream 512946 45008414 ~ 45012176 (+)
XLOC_008798 pdgfd coding upstream 529971 44929497 ~ 44995151 (+)
XLOC_008804 LO018197.1 coding downstream 16128 45544589 ~ 45558281 (+)
XLOC_008805 cldn15lb coding downstream 35030 45563491 ~ 45590345 (+)
XLOC_008806 atg16l1 coding downstream 63208 45591669 ~ 45637460 (+)
XLOC_008807 CU929115.1 coding downstream 85829 45614290 ~ 45614569 (+)
XLOC_008808 CU929115.2 coding downstream 88555 45617016 ~ 45617296 (+)
XLOC_008463 BX663520.1 misc upstream 24272840 21252191 ~ 21252282 (+)
XLOC_008797 CABZ01037139.1 non-coding upstream 663723 44861283 ~ 44861399 (+)
XLOC_008810 NA non-coding downstream 136943 45665404 ~ 45670549 (+)
XLOC_008811 NA non-coding downstream 400390 45928851 ~ 45948056 (+)
XLOC_008813 NA non-coding downstream 519762 46048223 ~ 46049113 (+)

Expression


Co-expression Network