XLOC_008800



Basic Information


Item Value
gene id XLOC_008800
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 45224937 ~ 45245369 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00018795
taaagcaCATTATATCTATAGAGTGTCCCTGTATACAAGTAtttatgcgtgtgtgtatgtgtgtgtgtgtgagcgtgaccTGCAGCAGGACGGGGCTGTAGACCTGACGCAGGGCCTGGTAAAGGGTGCTGATGGGAGACTCCAGCATGGAGGACACCAGGATGCAGCGCTGAAGGTTCTCCTCCGAAACCACACACGGATGAGGCTTGAAGAACACCAGAACTCGGCCATCACCGTCCATATTCTCCAGCTACACAGACAAAATAATATCATAAGATTtgacaaaattataaaatttaatgactaaatgttaaaat

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00018795 True 317 lncRNA 0.45 2 45224937 45245369

Neighbor


gene id symbol gene type direction distance location
XLOC_008799 NA coding upstream 212761 45008414 ~ 45012176 (+)
XLOC_008798 pdgfd coding upstream 229786 44929497 ~ 44995151 (+)
XLOC_008797 CABZ01037139.1 coding upstream 363538 44861283 ~ 44861399 (+)
XLOC_008796 NA coding upstream 414960 44538148 ~ 44809977 (+)
XLOC_008794 msantd4 coding upstream 731184 44472356 ~ 44493753 (+)
XLOC_008801 NA coding downstream 165254 45410623 ~ 45414747 (+)
XLOC_008802 NA coding downstream 220496 45465865 ~ 45470168 (+)
XLOC_008803 NA coding downstream 279753 45525122 ~ 45528461 (+)
XLOC_008804 LO018197.1 coding downstream 299220 45544589 ~ 45558281 (+)
XLOC_008805 cldn15lb coding downstream 318122 45563491 ~ 45590345 (+)
XLOC_008463 BX663520.1 misc upstream 23972655 21252191 ~ 21252282 (+)
XLOC_008795 NA non-coding upstream 736412 44486263 ~ 44488525 (+)
XLOC_008783 NA non-coding upstream 1154534 44066151 ~ 44070403 (+)
XLOC_008807 CU929115.1 non-coding downstream 368921 45614290 ~ 45614569 (+)
XLOC_008808 CU929115.2 non-coding downstream 371647 45617016 ~ 45617296 (+)

Expression



Co-expression Network