CI01000030_04961858_04963562


Basic Information

Item Value
gene id CI01000030_04961858_04963562
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 4961354 ~ 4964723 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_04961858_04963562.mRNA
AGTGCTTTTAAGACAATGTTTGTATAAGTATCCTTATAAATACAAAGACCAGAAAATGGCGTAACATGCACAAAAAAGGTTGACTTAAGTTTTGTTAGCATGCTAATAAGCAAGAGAAATAAGATATTAAGTCTGTTTCCTCCTCAGAGTAAATTGCGACTTTATTTATTTTTTGTAATTGTGACTTCTACTTGAGACTCACAATTTCGACTTTAATTGTGACTTTATTTTTCATAATTACCATTTCTTTCCAATAACCGTGCCTTAATTTCTTGTAATTGTGACATATACGCCACCATTCAGTTTGGAGTCAATGCGATTTTCTTTTTTTTAATGAAATTGATACTTTTATTCAGCAAGGATGCATTAAATTGATCATTGATTATAATGTTACAAAAGATGACATTGCGGGTGACATTGTTGAATTACAATCATGTAGCTGGTTCTCTAATCCACTTTTAAGTAGATTTGGCATGTTGGGGTTTTAAAATTAAGCCCTACATCTTCTCATTATGATTACTTATATCTGAAAACTACATGTGAAGTATAATAGTCTCATTCCCCCACTTCTTTCTACACAGAGGTTTTAACGTCACTTGCAAATAGGTGTATTGATTCGAAGAAAATATTCAAAATGTGCATCTCCTGAATGTGCTTCGCAGAAGGTTCTTGGCGGTCAGCAGAAAGAATCGGGAGCGTTTTGTCCCTGTGATAAATGGAGCGCTCTGGCAGGTCACTTCTCCCCCCTCAACCCTCCCCGAACGCCACAATTTGTTCCCTACAGAGGGTGGGAGACGAATCTCTGCGGGTGACAGATTTATTGGTATCCACATGAGGCAAAACACCTCGAAGTCCCTGTAAAGGCCCCCGGACCACTGCGGAGAGAGATTGAACTCCCATTTATATCCAGTTGGATTCCAGTAAAATATTTCATGTTTCATGAGGGTCGCACGAAGACCTGGAAGCCTGGATTTTGTGAAGAACAACATTTATTTTCACACATTAGGGCGACGAGCACCTTTGAAGGGACTATTAAAATATTCACGCCGCTGTAATGTGTCAACAGCATGGTTTTCTTGGTGTGCAGAAATATATGTGGAAGATTTCTGGTTGCCTGCAGGAGCTGGAACTGATTTTTTATTGGCCACTGGTGCTCAAAACATGACTCAGGGGCTGTTTTGCATGTGCGACGGCCCACTTCTGAGTTCACAGGTGTCCCGGCCGCAGAATCCACCTCGGAGAATGGCTCTAATTAACGGTGGTGCAGCTCTCTTGGACAGAAAGGACATGGGTGGTCCACCTCACGTTACCTCAATCTGTTCCCACCAGCCGCGCTGCTCCAAAAATATACAACGTTTTGGACCAGAGGTTTACAGTAAGCGCTATGACGCAAATCTCCCAGGGCTTTCCCGTCTCAAAGAACCTCCCAGCCAGAGACATGTTATTCTAATGGGTTAATGATCGGCTCTCAAGTTAGAGTGCCATTAAACGCAGGGCAAACTGTATCTCTTTCTGTCTTAACACACAAGCACACACACACTCAATCTACCCTGGGAAGAGTGTGGAGGGCTAATTGATGAAGATTCTTCCCTATCAAAACGGCCCACCATCATAAATGCCATTCCAGTGTGTTGCGCTGTTCAAACAGTGGCCCTGTGTTAATGGTTAGGTAGAAGTATTTGCTCTGCATTAGTCGGTACCTGAGCCGGCACAATAGTGACCCTTGATGATAGAGGAAGCAGACAAAAAGAGGATGACTAAATGGGTCTGAGTGCTACAGAAAGTCTTACTGCCGCTTGTCCCTCAGGAAAAGGTCAGCAAACATTTCAGCAGGTTAGACACCAATCATTCCTTAATGGAAAGATTGAGATTACGGCTTTTTGCTTTAATTAAGATATAGGTTACAAGATGATGTACTCTATATATACTTATGGTAAAATAACACTTTTATGGAGAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_04961858_04963562.mRNA True 1962 mRNA 0.41 2 4961354 4964723

Neighbor

gene id symbol gene type direction distance location
CI01000030_04941426_04953055 NA coding downstream 8299 4939651 ~ 4953055 (-)
CI01000030_04899225_04922577 NR5A2 coding downstream 38587 4899123 ~ 4922767 (-)
CI01000030_04878515_04882656 NA coding downstream 77826 4878451 ~ 4883528 (-)
CI01000030_04866293_04877658 NA coding downstream 83402 4865853 ~ 4877952 (-)
CI01000030_04756387_04793095 CAMSAP2, CAMSAP2A coding downstream 168185 4755347 ~ 4793169 (-)
CI01000030_05003713_05011870 NA coding upstream 38036 5002452 ~ 5012219 (-)
CI01000030_05080350_05087998 NA coding upstream 115627 5080350 ~ 5087998 (-)
CI01000030_05165181_05189898 NEK7 coding upstream 200232 5164955 ~ 5190040 (-)
CI01000030_05233712_05242487 LHX9 coding upstream 268743 5233466 ~ 5242487 (-)
CI01000030_05261553_05285669 NA coding upstream 296573 5261296 ~ 5286111 (-)
G160599 NA non-coding downstream 57589 4900974 ~ 4903765 (-)
G160619 NA non-coding downstream 134135 4825717 ~ 4827219 (-)
CI01000030_04737816_04748299 NA non-coding downstream 223648 4736453 ~ 4748299 (-)
G160519 NA non-coding downstream 406782 4552543 ~ 4554572 (-)
G160596 NA non-coding upstream 37222 5001945 ~ 5002219 (-)
G160673 NA non-coding upstream 68459 5033182 ~ 5033420 (-)
G160697 NA non-coding upstream 157447 5122170 ~ 5122560 (-)
G160704 NA non-coding upstream 163154 5127877 ~ 5128315 (-)
CI01000030_03491770_03493119 CELF5A other downstream 1468254 3490119 ~ 3493741 (-)
G160213 NA other downstream 1492192 3466353 ~ 3469162 (-)
G158980 NA other downstream 2428790 2499584 ~ 2536375 (-)
G158914 NA other downstream 2509636 2450849 ~ 2451718 (-)
CI01000030_02155901_02157314 NA other downstream 2802063 2155584 ~ 2157390 (-)
G160713 NA other upstream 454396 5419119 ~ 5423513 (-)
G160712 NA other upstream 492237 5456960 ~ 5512074 (-)
G160949 NA other upstream 832574 5797297 ~ 5800426 (-)
CI01000030_06131710_06138371 NA other upstream 1168652 6131090 ~ 6138406 (-)
CI01000030_06701334_06704398 MGC53794, FAM195A, FAM195A.S, MCRIP2 other upstream 1736332 6701055 ~ 6704745 (-)

Expression


Co-expression Network