CI01000030_06701334_06704398 (MGC53794, FAM195A, FAM195A.S, MCRIP2)


Basic Information

Item Value
gene id CI01000030_06701334_06704398
gene name MGC53794, FAM195A, FAM195A.S, MCRIP2
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 6701055 ~ 6704745 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_06701334_06704398.mRNA
AGGTTCTTCAGAAACCGTCTCTCACATGATGTACACAATAACCAGAGGTCCCAGCAAACTTGTTACACAACGGAGAACAGGTATAGTTTTGAACAGCATGCACAGTCTATAATACATATCAGCGCAATCGCCATCATTGAAAGTTCACCAGCACCGAAGATTGTATTTAACCGGCTGAACGGAAAGCGGTACCACAGATCCACCTCTCCAAAAGCTGCCAGTACTACTGAAGGATTCACCCCAGCACATGAGGAGAATGTTCGATTTGTTTATGAGGATTTTGTGCCTATTGATCTTGAGGAGTGGTGGGCCCAGCGTTTCCTGGCCAACATTGTTAACCTGTCATGACAGGTGCATGATGGGGCATGAGATGTGGCTGAGTGGTCCTGACTGAGGCAGTGCAGCCTGACTCTCCTGATGAGCTCAGGTGATAATGTGAGAGATTCGCACGCTGTGTGAATTCAGCCCTTCCTGTGGAACTGTTTGCCCAGCCGGACACAGATTCTCTCTCGTGCACACGGAAGATGATCAGAGATTTTTCTTTCTTTGTTAGAATGTGAGATGTCTGTTTTTCTCCACAGATCTTTGCAAAAAA

Function

symbol description
mcrip2 Predicted to be located in cytoplasmic stress granule and nucleus. Orthologous to human MCRIP2 (MAPK regulated corepressor interacting protein 2).

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_06701334_06704398.mRNA False 595 mRNA 0.47 3 6701087 6704398

Neighbor

gene id symbol gene type direction distance location
CI01000030_06645888_06646573 NA coding downstream 53631 6645802 ~ 6647456 (-)
CI01000030_06602837_06605662 NA coding downstream 95395 6602074 ~ 6605692 (-)
CI01000030_06570135_06578090 GLIS2A coding downstream 122997 6570022 ~ 6578090 (-)
CI01000030_06560646_06561937 NA coding downstream 139150 6559844 ~ 6561937 (-)
CI01000030_06558263_06559216 NA coding downstream 141603 6558075 ~ 6559484 (-)
CI01000030_06705681_06711246 GDE1 coding upstream 1026 6705424 ~ 6711246 (-)
CI01000030_06715403_06717267 HMOX2A coding upstream 10255 6714653 ~ 6717726 (-)
CI01000030_06747047_06752255 NA coding upstream 42562 6746960 ~ 6752411 (-)
CI01000030_06810754_06819241 XPNPEP1 coding upstream 106195 6810593 ~ 6819241 (-)
CI01000030_06825126_06834282 NA coding upstream 120675 6825073 ~ 6835144 (-)
G161519 NA non-coding downstream 101230 6594369 ~ 6599857 (-)
G161522 NA non-coding downstream 146588 6551771 ~ 6554499 (-)
G161399 NA non-coding downstream 446348 6248834 ~ 6254739 (-)
G161395 NA non-coding downstream 455069 6245801 ~ 6246018 (-)
G161394 NA non-coding downstream 456387 6244454 ~ 6244700 (-)
CI01000030_06841490_06848643 NA non-coding upstream 137027 6841072 ~ 6848659 (-)
G163043 NA non-coding upstream 162687 6867085 ~ 6867895 (-)
G163053 NA non-coding upstream 195546 6899944 ~ 6900921 (-)
G163070 NA non-coding upstream 239747 6944145 ~ 6944501 (-)
G163033 NA non-coding upstream 257665 6962063 ~ 6962326 (-)
CI01000030_06131710_06138371 NA other downstream 562681 6131090 ~ 6138406 (-)
G160949 NA other downstream 900661 5797297 ~ 5800426 (-)
G160712 NA other downstream 1189013 5456960 ~ 5512074 (-)
G160713 NA other downstream 1277574 5419119 ~ 5423513 (-)
G160213 NA other downstream 3231925 3466353 ~ 3469162 (-)
G163065 NA other upstream 220085 6924483 ~ 6925657 (-)
G163139 NA other upstream 445076 7149474 ~ 7150144 (-)
CI01000030_07736031_07737720 LSM7.L, GM13182, LSM7 other upstream 1031038 7735436 ~ 7737720 (-)
CI01000030_07788973_07791700 TUSC2B, TUSC2 other upstream 1084399 7788797 ~ 7792198 (-)
CI01000030_03491770_03493119 CELF5A other downstream 3207955 3490119 ~ 3493741 (-)

Expression


Co-expression Network